RNA–Protein interactions for RNA: ENST00000508559.1

BRCC3P1-201, Transcript of BRCA1/BRCA2-containing complex subunit 3 pseudogene 1, humanhuman

BASIC

Gene BRCC3P1, Length 951 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P1-201ENST00000508559 DUX4L4P0CJ87 422 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 DUX4L5P0CJ88 424 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 DUX4L6P0CJ89 424 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 DUX4L7P0CJ90 424 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 USF1P22415 310 aaPredicted RBP9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 INPP1P49441 399 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 NPY4RP50391 375 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 ZNF45Q02386 682 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 AESQ08117 197 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 PLAC9Q5JTB6 97 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 HACD4Q5VWC8 232 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 CD276Q5ZPR3 534 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 DUX4L9Q6RFH8 374 aaPredicted RBP9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 C17orf107Q6ZR85 190 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 LINC00299Q6ZSB3 139 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 CCDC190Q86UF4 302 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 OR4M2Q8NGB6 313 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 CLDND2Q8NHS1 167 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 FCAMRQ8WWV6 532 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 DYRK2Q92630 601 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 FOXC2Q99958 501 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 SSBP3Q9BWW4 388 aaPredicted RBP9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 WDR12Q9GZL7 423 aaKnown RBP9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 RIMS4Q9H426 269 aaPredicted RBP9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 C12orf4Q9NQ89 552 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 KCNIP1Q9NZI2 227 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 DUX4Q9UBX2 424 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 TRAPPC2LQ9UL33 140 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 FBN2P35556 2912 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 BAHCC1Q9P281 2608 aa9.18□□□□□ -0.94
BRCC3P1-201ENST00000508559 TRGV10A0A0A0MS01 117 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 MFNGO00587 321 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 GPR37O15354 613 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 ZNF737O75373 536 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 AMY2BP19961 511 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 PTBP1P26599 531 aaKnown RBP eCLIP9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 GLP1RP43220 463 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 CBX5P45973 191 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 RPL31P62899 125 aaKnown RBP9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 MRPS10P82664 201 aaKnown RBP9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 ZNF846Q147U1 533 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 ZNF260Q3ZCT1 412 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 WDR25Q64LD2 544 aaPredicted RBP9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 OLFML2AQ68BL7 652 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 SLC35E4Q6ICL7 350 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 FAM185AQ8N0U4 392 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 PLPPR1Q8TBJ4 325 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 CCDC107Q8WV48 283 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 NUDCD2Q8WVJ2 157 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 ST6GALNAC5Q9BVH7 336 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 SCPEP1Q9HB40 452 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 CTSZQ9UBR2 303 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 LPAR3Q9UBY5 353 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 KIF25Q9UIL4 384 aa9.17□□□□□ -0.94
BRCC3P1-201ENST00000508559 NOTCH2Q04721 2471 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 FLNBO75369 2602 aaKnown RBP9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 LOC105371242A0A075B767 164 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 IGHV4-61A0A0C4DH41 118 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 A0A1W2PPH5 198 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 hADV38S2A0JD32 116 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 ODAMA1E959 279 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 MEIS3P1A6NDR6 274 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 FOXI3A8MTJ6 420 aaPredicted RBP9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 VWC2LB2RUY7 222 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 RNF223E7ERA6 249 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 F5H0A9 414 aaPredicted RBP9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 SULT1C2O00338 296 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 TNFRSF13BO14836 293 aaPredicted RBP9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 PHF1O43189 567 aaPredicted RBP9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 FOXH1O75593 365 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 RBBP9O75884 186 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 ECDO95905 644 aaPredicted RBP9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 HLA-DQB1P01920 261 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 CSN2P05814 226 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 LPLP06858 475 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 PTHLHP12272 177 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 ETV6P41212 452 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 GLIPR1P48060 266 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 P2RX3P56373 397 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 C6orf183Q5T699 404 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 TRIQKQ629K1 86 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 ZNF497Q6ZNH5 498 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 BTN2A1Q7KYR7 527 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 MOB1BQ7L9L4 216 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 RTN4RL2Q86UN3 420 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 Q8N402 240 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 TPRX1Q8N7U7 411 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 OR4K15Q8NH41 348 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 GCDHQ92947 438 aaPredicted RBP9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 HDHD3Q9BSH5 251 aaPredicted RBP9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 REG4Q9BYZ8 158 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 SHARPINQ9H0F6 387 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 RAB9BQ9NP90 201 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 OR6C3Q9NZP0 311 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 ELF5Q9UKW6 265 aaPredicted RBP9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 MGAT4AQ9UM21 535 aa9.16□□□□□ -0.94
BRCC3P1-201ENST00000508559 TRBV23-1A0A0A0MS06 115 aa9.15□□□□□ -0.94
BRCC3P1-201ENST00000508559 GABARAPH6UMI1 98 aa9.15□□□□□ -0.94
BRCC3P1-201ENST00000508559 MT-ND4P03905 459 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms