RNA–Protein interactions for RNA: ENST00000503945.2

MED28-203, Transcript of mediator complex subunit 28, humanhuman

TSL 1 (best)

Gene MED28, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-203ENST00000503945 NFYBP25208 207 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 MNDAP41218 407 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 PPP3R1P63098 170 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 ATXN7L3Q14CW9 347 aaPredicted RBP9.6□□□□□ -0.87
MED28-203ENST00000503945 ZSCAN26Q16670 478 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 LRRC36Q1X8D7 754 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 NSUN5P1Q3KNT7 163 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 PAN3Q58A45 887 aaKnown RBP9.6□□□□□ -0.87
MED28-203ENST00000503945 CCDC144NLQ6NUI1 221 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 ZNF529Q6P280 563 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 ASCL4Q6XD76 172 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 C16orf82Q7Z2V1 217 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 CENPVQ7Z7K6 275 aaPredicted RBP9.6□□□□□ -0.87
MED28-203ENST00000503945 OR51T1Q8NGJ9 327 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 CYGBQ8WWM9 190 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 TMEM106AQ96A25 262 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 COQ2Q96H96 371 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 TMEM80Q96HE8 168 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 FAM192AQ9GZU8 254 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 METTL9Q9H1A3 318 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 TMEM138Q9NPI0 162 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 C8orf4Q9NR00 106 aa9.6□□□□□ -0.87
MED28-203ENST00000503945 PAK1IP1Q9NWT1 392 aaPredicted RBP9.6□□□□□ -0.87
MED28-203ENST00000503945 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.6□□□□□ -0.87
MED28-203ENST00000503945 FAM172BPA6NC97 362 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 OOSP1A8MZH6 123 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 HSPB6O14558 160 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 IGLV1-47P01700 117 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 PRB2P02812 416 aaPredicted RBP9.59□□□□□ -0.87
MED28-203ENST00000503945 FAM106CPP0CH98 169 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 CD28P10747 220 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 GZMHP20718 246 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 CD24P25063 80 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 CD34P28906 385 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 ZNF93P35789 620 aaPredicted RBP9.59□□□□□ -0.87
MED28-203ENST00000503945 VDAC2P45880 294 aaPredicted RBP9.59□□□□□ -0.87
MED28-203ENST00000503945 KCNJ3P48549 501 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 RBM39Q14498 530 aaKnown RBP9.59□□□□□ -0.87
MED28-203ENST00000503945 IL13RA2Q14627 380 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 C17orf58Q2M2W7 97 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 BEAN1Q3B7T3 259 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 OR2G6Q5TZ20 316 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 BAIAP2L2Q6UXY1 529 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 DHRSXQ8N5I4 330 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 SETD9Q8NE22 299 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 Q8NFD4 153 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 OR5AU1Q8NGC0 362 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 OR51A2Q8NGJ7 313 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 OR9G1Q8NH87 305 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 GHSRQ92847 366 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 LIN7BQ9HAP6 207 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 TAS2R4Q9NYW5 299 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 CKLFQ9UBR5 152 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 DIMT1Q9UNQ2 313 aaKnown RBP9.59□□□□□ -0.87
MED28-203ENST00000503945 ST3GAL6Q9Y274 331 aa9.59□□□□□ -0.87
MED28-203ENST00000503945 EXOSC1Q9Y3B2 195 aaKnown RBP9.59□□□□□ -0.87
MED28-203ENST00000503945 A0A087X0M5 115 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 TRAV24A0A0B4J272 114 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 A0A1B0GX30 115 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 GABRPO00591 440 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 ZNF780AO75290 641 aaPredicted RBP9.58□□□□□ -0.88
MED28-203ENST00000503945 CDRT1O95170 752 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 CLIC3O95833 236 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 CGB3P0DN86 165 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 CGB7P0DN87 165 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 BDKRB2P30411 391 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 OR3A4PP47883 348 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 HLA-DRB5Q30154 266 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 Q6ZS46 218 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 SLC16A12Q6ZSM3 486 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 NDUFA11Q86Y39 141 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 LYG1Q8N1E2 194 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 PACRGLQ8N7B6 248 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 OR4F17Q8NGA8 305 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 OR10K1Q8NGX5 313 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 RBM14Q96PK6 669 aaKnown RBP9.58□□□□□ -0.88
MED28-203ENST00000503945 OR4F4Q96R69 305 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 OCSTAMPQ9BR26 566 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 WNT10AQ9GZT5 417 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 PPIL3Q9H2H8 161 aaKnown RBP9.58□□□□□ -0.88
MED28-203ENST00000503945 ZNF286AQ9HBT8 521 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 KIF25Q9UIL4 384 aa9.58□□□□□ -0.88
MED28-203ENST00000503945 LY6LH3BQJ8 138 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 J3QR06 171 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 M0QZK8 103 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 XPNPEP2O43895 674 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 OR7C1O76099 320 aaPredicted RBP9.57□□□□□ -0.88
MED28-203ENST00000503945 GDNFP39905 211 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 GLP1RP43220 463 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 ST3GAL4Q11206 333 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 GPR176Q14439 515 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 ABCA11PQ4W5N1 156 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 YIF1BQ5BJH7 314 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 TPTE2P1Q5T6R2 138 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 DDI2Q5TDH0 399 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 XAF1Q6GPH4 301 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 THNSL2Q86YJ6 484 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 OSR2Q8N2R0 312 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 SUMF2Q8NBJ7 301 aa9.57□□□□□ -0.88
MED28-203ENST00000503945 OR10A7Q8NGE5 316 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms