RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 RRP8O43159 456 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 KBTBD11O94819 623 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR6A2O95222 327 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SLC35E2P0CK97 266 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 RD3LP0DJH9 198 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 EGR1P18146 543 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PMCHP20382 165 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SERPINA2P20848 420 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 DUSP1P28562 367 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 HSPB3Q12988 150 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF154Q13106 437 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 RAB35Q15286 201 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF74Q16587 644 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PRSS53Q2L4Q9 553 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 COX20Q5RI15 118 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 TMPPEQ6ZT21 453 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 GDF7Q7Z4P5 450 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SPNS2Q8IVW8 549 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR2C3Q8N628 320 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR4S1Q8NGB4 309 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR5AU1Q8NGC0 362 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR4X1Q8NH49 305 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF563Q8TA94 476 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CPT1CQ8TCG5 803 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SCGB1C1Q8TD33 95 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 FRZBQ92765 325 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR10C1Q96KK4 312 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 TGM7Q96PF1 710 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR8B4Q96RC9 309 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PRR25Q96S07 402 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CHRDL1Q9BU40 450 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ADAT1Q9BUB4 502 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ALG12Q9BV10 488 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SAMD10Q9BYL1 202 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 WDR76Q9H967 626 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PEF1Q9UBV8 284 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CPSF4LA6NMK7 179 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 C9orf172C9J069 976 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 J3KTA2 159 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 EREGO14944 169 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PPP1R3DO95685 299 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 F13BP05160 661 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PFN1P07737 140 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR5G3P0C626 314 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ASAH2BP0C7U1 165 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ALOX5APP20292 161 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 DRD1P21728 446 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CEACAM3P40198 252 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CLDN6P56747 220 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 S100A10P60903 97 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CSNK1G2P78368 415 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 RHOGP84095 191 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF85Q03923 595 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 EGR4Q05215 589 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 RAB32Q13637 225 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR7A5Q15622 319 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PLPPR5Q32ZL2 321 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 TP53I3Q53FA7 332 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF774Q6NX45 483 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 TEX43Q6ZNM6 134 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CMTM1Q8IZ96 169 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF101Q8IZC7 436 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF321PQ8N8H1 164 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 ZNF248Q8NDW4 579 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR51G1Q8NGK1 321 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 OR13C5Q8NGS8 318 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 MBD3L1Q8WWY6 194 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 DYRK2Q92630 601 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 PPP1R14AQ96A00 147 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 STARD4Q96DR4 205 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SFRP2Q96HF1 295 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 TBX15Q96SF7 602 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CITED2Q99967 270 aaPredicted RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 SPANXDQ9BXN6 97 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 VCX2Q9H322 139 aa2.43□□□□□ -2.02
NEDD4-204ENST00000503468 MRPS2Q9Y399 296 aaKnown RBP2.43□□□□□ -2.02
NEDD4-204ENST00000503468 CACNA1DQ01668 2161 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 RYR1P21817 5038 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 TMEM235A6NFC5 223 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 EPOPA6NHQ4 379 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 MSTNO14793 375 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 PIN1P1O15428 100 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 NRASP01111 189 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 KRASP01116 189 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 KLK1P06870 262 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SFTPBP07988 381 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 OR4Q2P0C623 313 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 VDAC1P21796 283 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 CD1BP29016 333 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 BRS3P32247 399 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ACAA2P42765 397 aaKnown RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SOX2P48431 317 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 GPM6AP51674 278 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 EMP2P54851 167 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 RRADP55042 308 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SNRPNP63162 240 aaKnown RBP2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SEC11AP67812 179 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 ALG10Q5BKT4 473 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 SLC18B1Q6NT16 456 aa2.42□□□□□ -2.02
NEDD4-204ENST00000503468 LIAT1Q6ZQX7 453 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms