RNA–Protein interactions for RNA: ENST00000503338.5

TOPBP1-202, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 3

Gene TOPBP1, Length 618 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-202ENST00000503338 SDSLQ96GA7 329 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 MED30Q96HR3 178 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 GINS4Q9BRT9 223 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 TINAGL1Q9GZM7 467 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 ALX4Q9H161 411 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 C20orf85Q9H1P6 137 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 WDR13Q9H1Z4 485 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 MMP28Q9H239 520 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF665Q9H7R5 613 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 GPN1Q9HCN4 374 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 MYOZ1Q9NP98 299 aaPredicted RBP6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 NUDT15Q9NV35 164 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 EHFQ9NZC4 300 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 KCNIP1Q9NZI2 227 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 SLC23A1Q9UHI7 598 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 TRAPPC2LQ9UL33 140 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 PPIAL4AQ9Y536 164 aa6.83□□□□□ -1.32
TOPBP1-202ENST00000503338 ICE1Q9Y2F5 2266 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 A0A1B0GVG6 124 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 FAM221AA4D161 298 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 C19orf84I3L1E1 186 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 K7N7A8 449 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 HSPB6O14558 160 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 MGST3O14880 152 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 FABP7O15540 132 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 SSX4O60224 188 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 PFDN1O60925 122 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 TK1P04183 234 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 IL5P05113 134 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 DANCRP0C864 163 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF735P0CB33 412 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 TRAPPC2P0DI81 140 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 TRAPPC2BP0DI82 140 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 OR5H8P0DN80 308 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 EGR1P18146 543 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 ERP29P30040 261 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 GABRA2P47869 451 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 BCAP31P51572 246 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 CCR6P51684 374 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 TAS2R31P59538 309 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 UBE2MP61081 183 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 SEC61A1P61619 476 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 TLE4Q04727 773 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 TATDN3Q17R31 274 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 SCGB2B2Q4G0G5 96 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 METTL11BQ5VVY1 283 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 STUMQ69YW2 141 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 C11orf71Q6IPW1 123 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 FAHD2BQ6P2I3 314 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 C11orf88Q6PI97 169 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 BRICD5Q6PL45 260 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 DHRS11Q6UWP2 260 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 C20orf204Q6ZNR8 217 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 SLC36A1Q7Z2H8 476 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 ASCC1Q8N9N2 400 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 BOLLQ8N9W6 283 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 OR4D10Q8NGI6 311 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 OR4A4PQ8NGN8 299 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 ANGPTL6Q8NI99 470 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 MRPL30Q8TCC3 161 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 CHAC2Q8WUX2 184 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 CCL17Q92583 94 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 FAHD2AQ96GK7 314 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 SLC6A7Q99884 636 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 VRK1Q99986 396 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 HDHD3Q9BSH5 251 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 TRAF4Q9BUZ4 470 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 MBNL3Q9NUK0 354 aaKnown RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF581Q9P0T4 197 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 OPN4Q9UHM6 478 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF230Q9UIE0 474 aaPredicted RBP6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF222Q9UK12 451 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 PCDHB10Q9UN67 800 aa6.82□□□□□ -1.32
TOPBP1-202ENST00000503338 hCG_2014768A0A024R1R8 64 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 IGKV1D-17A0A075B6S4 117 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 TMEM82A0PJX8 343 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 CEACAM18A8MTB9 384 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 SIGLEC5O15389 551 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 PSPNO60542 156 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF737O75373 536 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 CYB5R3P00387 301 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 GZMHP20718 246 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 FPR2P25090 351 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 OR3A1P47881 315 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 RAB25P57735 213 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 IL13RA1P78552 427 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 HLA-DRB3P79483 266 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 KRBOX4Q5JUW0 171 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 FAAP20Q6NZ36 180 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 LPCAT3Q6P1A2 487 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 C17orf107Q6ZR85 190 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 RTN4RL2Q86UN3 420 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 LHFPL1Q86WI0 220 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 MUC20Q8N307 709 aaPredicted RBP6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 CD177Q8N6Q3 437 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 ZNF565Q8N9K5 539 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 ZFAND1Q8TCF1 268 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 FAM216AQ8WUB2 273 aa6.81□□□□□ -1.32
TOPBP1-202ENST00000503338 GIMAP1Q8WWP7 306 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms