RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 OR8B4Q96RC9 309 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 RASL10BQ96S79 203 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 PHB2Q99623 299 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 NICN1Q9BSH3 213 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 C5orf66Q9H5L9 145 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 MKKSQ9NPJ1 570 aaPredicted RBP5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 FGF21Q9NSA1 209 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 CUTCQ9NTM9 273 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 SIDT1Q9NXL6 827 aaKnown RBP5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 DKK4Q9UBT3 224 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 SERTAD3Q9UJW9 196 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 FUT9Q9Y231 359 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 ZNF443Q9Y2A4 671 aaPredicted RBP5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 RBM7Q9Y580 266 aaKnown RBP5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 ZNF736B4DX44 427 aaPredicted RBP5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 LMO7DNF2Z398 122 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 M0QZK8 103 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 STK17BO94768 372 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 HIST1H1CP16403 213 aaKnown RBP5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 GABRR1P24046 479 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 CHATP28329 748 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 RAB38P57729 211 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 TPTE2P1Q5T6R2 138 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 C16orf47Q6ZP98 133 aaPredicted RBP5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 MYPOPQ86VE0 399 aaPredicted RBP5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 PLXDC1Q8IUK5 500 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 GID4Q8IVV7 300 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 WDFY1Q8IWB7 410 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 CDRT4Q8N9R6 151 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 ZFP62Q8NB50 900 aaPredicted RBP5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 OR52E2Q8NGJ4 325 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 ASB13Q8WXK3 278 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 TAAR8Q969N4 342 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 FAM46BQ96A09 425 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 TNFRSF13CQ96RJ3 184 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 AMELYQ99218 206 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 LPAR4Q99677 370 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 ARV1Q9H2C2 271 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 ICAM5Q9UMF0 924 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 THADAQ6YHU6 1953 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 SLC33A1O00400 549 aaPredicted RBP5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 SYT7O43581 403 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 PRH1P02810 166 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 B4GALT1P15291 398 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 FOLR1P15328 257 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 LINC00310P59036 64 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 SLC35A1P78382 337 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 H3F3AP84243 136 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 ICAM4Q14773 271 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 OCIAD2Q56VL3 154 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 RIPPLY2Q5TAB7 128 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 GUSBP11Q6P575 273 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 MRGPRGQ86SM5 289 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 TMEM123Q8N131 208 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 CADM4Q8NFZ8 388 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 NT5CQ8TCD5 201 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 RNF128Q8TEB7 428 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 TMEM106AQ96A25 262 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 TMEM56Q96MV1 263 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 MIEN1Q9BRT3 115 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 ZNF2Q9BSG1 426 aaPredicted RBP5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 CST9LQ9H4G1 147 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 PILRAQ9UKJ1 303 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 TMEM56-RWDD3S4R434 201 aa5.03□□□□□ -1.6
SOX2-OT-218ENST00000498731 A0A1B0GU03 582 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 GRIFINA4D1Z8 144 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 TLCD2A6NGC4 264 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 H0YIG0 161 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 SRPX2O60687 465 aaPredicted RBP5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 OPN1LWP04000 364 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 CTSDP07339 412 aaPredicted RBP5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 CELA3BP08861 270 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 FBLP22087 321 aaKnown RBP5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 RPL12P30050 165 aaKnown RBP5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 NXPH1P58417 271 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 IL15RAQ13261 267 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 HMGN3Q15651 99 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 ARHGAP11BQ3KRB8 267 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 CHRFAM7AQ494W8 412 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 SLC25A45Q8N413 288 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 OR52L1Q8NGH7 329 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 FLVCR1-AS1Q8TAF5 88 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 VN1R17PQ8TDU5 208 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 TNFRSF14Q92956 283 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 PINX1Q96BK5 328 aaKnown RBP5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 CIB3Q96Q77 187 aaPredicted RBP5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 NMNAT3Q96T66 252 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 PCGF1Q9BSM1 259 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 OR11A1Q9GZK7 315 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 CMC2Q9NRP2 79 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 OR52A1Q9UKL2 312 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 LSM5Q9Y4Y9 91 aaKnown RBP5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 PCDH15Q96QU1 1955 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 FLNBO75369 2602 aaKnown RBP5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 ATG2AQ2TAZ0 1938 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 SPTAN1Q13813 2472 aaKnown RBP5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 SH2D1BO14796 132 aa5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 CDC40O60508 579 aaKnown RBP eCLIP5.02□□□□□ -1.61
SOX2-OT-218ENST00000498731 CALCBP10092 127 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms