RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 HOXB13Q92826 284 aaPredicted RBP11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 RPRMQ9NS64 109 aa11.37□□□□□ -0.59
GAPVD1-220ENST00000497580 LINC00614P0C842 121 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 ENDOGQ14249 297 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 FAM189A2Q15884 450 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 BSXQ3C1V8 233 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 THEM4Q5T1C6 240 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 NOXO1Q8NFA2 376 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 RNASE8Q8TDE3 154 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 RBKSQ9H477 322 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 A0A0J9YY10 115 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 GRIFINA4D1Z8 144 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 LRRC3CA6NJW4 275 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 OR2J2O76002 312 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 DXOO77932 396 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 OR10J1P30954 320 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 SLC6A8P48029 635 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 RPS18P62269 152 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 HSF1Q00613 529 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 SCGB1C1Q8TD33 95 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 OR2J1Q9GZK6 312 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 M0QZK8 103 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 CHST1O43916 411 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 GGCTO75223 188 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 IL33O95760 270 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 PTTG1IPP53801 180 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 CLRN1P58418 232 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 DCAF7P61962 342 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 ZFP36L1Q07352 338 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 FOXF1Q12946 379 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 MFAP5Q13361 173 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 TMEM41BQ5BJD5 291 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 VN1R17PQ8TDU5 208 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 EXTL1Q92935 676 aa11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 NUDT16L1Q9BRJ7 211 aaKnown RBP11.36□□□□□ -0.59
GAPVD1-220ENST00000497580 TMEM210A6NLX4 147 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 BRS3P32247 399 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 RAB7AP51149 207 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 IZUMO4Q1ZYL8 232 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 C16orf47Q6ZP98 133 aaPredicted RBP11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 MSI2Q96DH6 328 aaKnown RBP11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 OR51I2Q9H344 312 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 MTCH2Q9Y6C9 303 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 B4E171 279 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 TNFSF14O43557 240 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 CTSEP14091 401 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 HOXB2P14652 356 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 CCKARP32238 428 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 TSPAN7P41732 249 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 ECI1P42126 302 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 CNN1P51911 297 aaKnown RBP11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 DEGS2Q6QHC5 323 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 DPPA3Q6W0C5 159 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 CPEB3Q8NE35 698 aaKnown RBP11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 PTPMT1Q8WUK0 201 aaPredicted RBP11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 ASB10Q8WXI3 467 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 POU2F2P09086 479 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 TMEM241Q24JQ0 296 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 Q6ZVH6 145 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 C18orf12Q96KH6 178 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 WNT5BQ9H1J7 359 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 ZNF286AQ9HBT8 521 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 SERINC1Q9NRX5 453 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 FBLN5Q9UBX5 448 aa11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 PRRC2CQ9Y520 2896 aaKnown RBP11.35□□□□□ -0.59
GAPVD1-220ENST00000497580 ZNF320A2RRD8 509 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 NUPR1O60356 82 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 TMEM50AO95807 157 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 CHRNB4P30926 498 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 DAP3P51398 398 aaKnown RBP11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 FUT7Q11130 342 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 FAM78BQ5VT40 261 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 ZNF776Q68DI1 518 aaPredicted RBP11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 BADQ92934 168 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 ZNF845Q96IR2 970 aaPredicted RBP11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 CBY3A6NI87 242 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 AADACP22760 399 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 OR2T10Q8NGZ9 312 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 TMEM170AQ8WVE7 144 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 ACY3Q96HD9 319 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 PLA2G2FQ9BZM2 168 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 DIDO1Q9BTC0 2240 aaKnown RBP11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 C3orf85A0A1B0GTC6 90 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 C20orf202A1L168 122 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 MTCP1P56278 107 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 GABREP78334 506 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 OR4D5Q8NGN0 318 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 TWSG1Q9GZX9 223 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 PIGLQ9Y2B2 252 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 LHFPL6Q9Y693 200 aa11.34□□□□□ -0.59
GAPVD1-220ENST00000497580 E9PLN8 166 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 MS4A18H0YCH9 400 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 PFN1P07737 140 aaKnown RBP11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 IAPPP10997 89 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 ZNF17P17021 662 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 MSX1P28360 303 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 MS4A18Q3C1V0 323 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 GBGT1Q8N5D6 347 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 CCDC71LQ8N9Z2 235 aa11.33□□□□□ -0.6
GAPVD1-220ENST00000497580 C22orf15Q8WYQ4 148 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms