RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, humanhuman

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-A-208ENST00000496081 KCNJ16Q9NPI9 418 aa13.8□□□□□ -0.2
HLA-A-208ENST00000496081 TREM2Q9NZC2 230 aa13.8□□□□□ -0.2
HLA-A-208ENST00000496081 MGAT4CQ9UBM8 478 aa13.8□□□□□ -0.2
HLA-A-208ENST00000496081 ZDHHC8Q9ULC8 765 aa13.8□□□□□ -0.2
HLA-A-208ENST00000496081 NPTNQ9Y639 398 aa13.8□□□□□ -0.2
HLA-A-208ENST00000496081 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.79□□□□□ -0.2
HLA-A-208ENST00000496081 SRRM5B3KS81 715 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 SMLR1H3BR10 107 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 KNG1P01042 644 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 HLA-AP01891 365 aaKnown RBP13.79□□□□□ -0.2
HLA-A-208ENST00000496081 AKR1C4P17516 323 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 EGR1P18146 543 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 LMO1P25800 156 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 MDH2P40926 338 aaKnown RBP13.79□□□□□ -0.2
HLA-A-208ENST00000496081 GATA4P43694 442 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 SORDQ00796 357 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 SURF2Q15527 256 aaPredicted RBP13.79□□□□□ -0.2
HLA-A-208ENST00000496081 SMIM21Q3B7S5 101 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 IGSF11Q5DX21 431 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 LYG2Q86SG7 212 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 NOXA1Q86UR1 476 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 MOGAT3Q86VF5 341 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 TMEM185AQ8NFB2 350 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 PRR7Q8TB68 274 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 LRRC46Q96FV0 321 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 TMPRSS13Q9BYE2 586 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 ZNF436Q9C0F3 470 aaPredicted RBP13.79□□□□□ -0.2
HLA-A-208ENST00000496081 DECR2Q9NUI1 292 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 IL19Q9UHD0 177 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 GLS2Q9UI32 602 aa13.79□□□□□ -0.2
HLA-A-208ENST00000496081 C9orf170A2RU37 121 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.78□□□□□ -0.2
HLA-A-208ENST00000496081 FABP7O15540 132 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 PSPNO60542 156 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 SCTP09683 121 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 PI3P19957 117 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 TNFAIP6P98066 277 aaPredicted RBP13.78□□□□□ -0.2
HLA-A-208ENST00000496081 C2orf68Q2NKX9 166 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 ZNF880Q6PDB4 577 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 GCSAMQ8N6F7 178 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 UXS1Q8NBZ7 420 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 OR2AK2Q8NG84 335 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 TMEM230Q96A57 120 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 RASL12Q9NYN1 266 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 ROS1P08922 2347 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 RFPL4AA6NLU0 287 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 TRDCB7Z8K6 153 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 RFPL4AL1F8VTS6 287 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 C1QBP02746 253 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 RCC1P18754 421 aaPredicted RBP13.78□□□□□ -0.2
HLA-A-208ENST00000496081 FCGR2CP31995 323 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 ECI1P42126 302 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 TAS2R31P59538 309 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 DHODHQ02127 395 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 TMEM128Q5BJH2 165 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 ZNF497Q6ZNH5 498 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 GAPTQ8N292 157 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 C12orf45Q8N5I9 185 aaPredicted RBP13.78□□□□□ -0.2
HLA-A-208ENST00000496081 NEUROG1Q92886 237 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 DLL4Q9NR61 685 aa13.78□□□□□ -0.2
HLA-A-208ENST00000496081 KIR2DS1A0A191URI9 304 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 VSTM5A8MXK1 200 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 E7EQL1 145 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 LHBP01229 141 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 TFF1P04155 84 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 CD3EP07766 207 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 TNFSF4P23510 183 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 KIR2DS4P43632 304 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 UQCRFS1P47985 274 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 IL13RA1P78552 427 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 TFF3Q07654 80 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 KIR2DS1Q14954 304 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 ATXN7L3Q14CW9 347 aaPredicted RBP13.77□□□□□ -0.21
HLA-A-208ENST00000496081 NLRC3Q7RTR2 1065 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 SLC23A1Q9UHI7 598 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 HIVEP3Q5T1R4 2406 aa13.77□□□□□ -0.21
HLA-A-208ENST00000496081 POM121CA8CG34 1229 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 IFNL4K9M1U5 179 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 ADH4P08319 380 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 PGAM2P15259 253 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 VAMP1P23763 118 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 SERPINF1P36955 418 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 GLP1RP43220 463 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 GZMKP49863 264 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 HERPUD1Q15011 391 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 KCNJ8Q15842 424 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 OR5T2Q8NGG2 359 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 DHRS9Q9BPW9 319 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 GCM1Q9NP62 436 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 PIPOXQ9P0Z9 390 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 CACNA1DQ01668 2161 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 ANKHD1Q8IWZ3 2542 aaKnown RBP13.76□□□□□ -0.21
HLA-A-208ENST00000496081 IGKV1-6A0A0C4DH72 117 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 TUBAL3A6NHL2 446 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 C17orf100A8MU93 164 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 H7C1Q1 480 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 GOSR2O14653 212 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 SIAH2O43255 324 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 OR2A4O95047 310 aa13.76□□□□□ -0.21
HLA-A-208ENST00000496081 GNLYP22749 145 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms