RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 HIST2H2BDQ6DRA6 164 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 C16orf82Q7Z2V1 217 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 Q8NFD4 153 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 OR51A2Q8NGJ7 313 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 CYGBQ8WWM9 190 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 RGP1Q92546 391 aaPredicted RBP10.23□□□□□ -0.77
PTPRF-214ENST00000496043 AKR1E2Q96JD6 320 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 METTL9Q9H1A3 318 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 ZNF286AQ9HBT8 521 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 TMEM138Q9NPI0 162 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 C8orf4Q9NR00 106 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 TAS2R4Q9NYW5 299 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 ZNF281Q9Y2X9 895 aa10.23□□□□□ -0.77
PTPRF-214ENST00000496043 EXOSC1Q9Y3B2 195 aaKnown RBP10.23□□□□□ -0.77
PTPRF-214ENST00000496043 MEIKINA0A087WXM9 373 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 A0A087X0M5 115 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 TRAV24A0A0B4J272 114 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 A0A1B0GX30 115 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 OOSP1A8MZH6 123 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 CD28P10747 220 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 CD24P25063 80 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 NFYBP25208 207 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 VDAC2P45880 294 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-214ENST00000496043 KCNJ3P48549 501 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 PPP3R1P63098 170 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 LRRC36Q1X8D7 754 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 HLA-DRB5Q30154 266 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 NSUN5P1Q3KNT7 163 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 XAF1Q6GPH4 301 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 Q6ZS46 218 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 DHRSXQ8N5I4 330 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 PACRGLQ8N7B6 248 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 SETD9Q8NE22 299 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 OR10K1Q8NGX5 313 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 TMEM106AQ96A25 262 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 TMEM80Q96HE8 168 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 OR5M11Q96RB7 305 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 S100A13Q99584 98 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 WNT10AQ9GZT5 417 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 FAM192AQ9GZU8 254 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 PPIL3Q9H2H8 161 aaKnown RBP10.22□□□□□ -0.77
PTPRF-214ENST00000496043 LIN7BQ9HAP6 207 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 PCDHB16Q9NRJ7 776 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 KIF25Q9UIL4 384 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 DIMT1Q9UNQ2 313 aaKnown RBP10.22□□□□□ -0.77
PTPRF-214ENST00000496043 TET2Q6N021 2002 aaPredicted RBP10.22□□□□□ -0.77
PTPRF-214ENST00000496043 DSCAML1Q8TD84 2053 aa10.22□□□□□ -0.77
PTPRF-214ENST00000496043 CMYA5Q8N3K9 4069 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 FAM172BPA6NC97 362 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 LY6LH3BQJ8 138 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 HSPB6O14558 160 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 CLIC3O95833 236 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 CSTBP04080 98 aaKnown RBP10.21□□□□□ -0.77
PTPRF-214ENST00000496043 BDKRB2P30411 391 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 ZNF93P35789 620 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-214ENST00000496043 MNDAP41218 407 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 OR3A4PP47883 348 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 RBM39Q14498 530 aaKnown RBP10.21□□□□□ -0.77
PTPRF-214ENST00000496043 TPTE2P1Q5T6R2 138 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 CCDC144NLQ6NUI1 221 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 NDUFA11Q86Y39 141 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 C1QL4Q86Z23 238 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 LYG1Q8N1E2 194 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 OSR2Q8N2R0 312 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 OR9G1Q8NH87 305 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 GHSRQ92847 366 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 OCSTAMPQ9BR26 566 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 PAK1IP1Q9NWT1 392 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-214ENST00000496043 CALYQ9NYX4 217 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 IDI2-AS1Q9NZ38 188 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 CLEC2DQ9UHP7 191 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 ST3GAL6Q9Y274 331 aa10.21□□□□□ -0.77
PTPRF-214ENST00000496043 SIRT4Q9Y6E7 314 aaPredicted RBP10.21□□□□□ -0.77
PTPRF-214ENST00000496043 KIAA2026Q5HYC2 2103 aa10.21□□□□□ -0.78
PTPRF-214ENST00000496043 J3QR06 171 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 CDRT1O95170 752 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 GZMHP20718 246 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 GLP1RP43220 463 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 ADARB1P78563 741 aaKnown RBP10.2□□□□□ -0.78
PTPRF-214ENST00000496043 PIGYQ3MUY2 71 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 DDI2Q5TDH0 399 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 SLC16A12Q6ZSM3 486 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 CENPVQ7Z7K6 275 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-214ENST00000496043 SUMF2Q8NBJ7 301 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 OR4F17Q8NGA8 305 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 OR5AU1Q8NGC0 362 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 OR10A7Q8NGE5 316 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 OR13A1Q8NGR1 328 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 OR52N1Q8NH53 320 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 RFESDQ8TAC1 157 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 WIPF2Q8TF74 440 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-214ENST00000496043 GGHQ92820 318 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 SMIM19Q96E16 107 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 KIRREL1Q96J84 757 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 RBM14Q96PK6 669 aaKnown RBP10.2□□□□□ -0.78
PTPRF-214ENST00000496043 OR4F4Q96R69 305 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 CITED2Q99967 270 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-214ENST00000496043 SLC25A33Q9BSK2 321 aa10.2□□□□□ -0.78
PTPRF-214ENST00000496043 DPCDQ9BVM2 203 aaPredicted RBP10.2□□□□□ -0.78
PTPRF-214ENST00000496043 MMP28Q9H239 520 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms