RNA–Protein interactions for RNA: ENST00000495509.6

PHF1-211, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 1,752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-211ENST00000495509 TMEM246Q9BRR3 403 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 MTFP1Q9UDX5 166 aa13.09□□□□□ -0.31
PHF1-211ENST00000495509 RBMX2Q9Y388 322 aaKnown RBP13.09□□□□□ -0.31
PHF1-211ENST00000495509 DOCK11Q5JSL3 2073 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 SULT1C2O00338 296 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 PPIHO43447 177 aaKnown RBP13.08□□□□□ -0.32
PHF1-211ENST00000495509 SSX4O60224 188 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 RBBP9O75884 186 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 GDNFP39905 211 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 OR3A1P47881 315 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 MRPS10P82664 201 aaKnown RBP13.08□□□□□ -0.32
PHF1-211ENST00000495509 ATXN7L3Q14CW9 347 aaPredicted RBP13.08□□□□□ -0.32
PHF1-211ENST00000495509 CCBE1Q6UXH8 406 aaPredicted RBP13.08□□□□□ -0.32
PHF1-211ENST00000495509 ZNF788Q6ZQV5 615 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 CADM3Q8N126 398 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 FGFRL1Q8N441 504 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 ZNF525Q8N782 197 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 FAM216BQ8N7L0 139 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 DRAXINQ8NBI3 349 aaPredicted RBP13.08□□□□□ -0.32
PHF1-211ENST00000495509 ST6GALNAC5Q9BVH7 336 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 CHODLQ9H9P2 273 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 SEBOXQ9HB31 216 aaPredicted RBP13.08□□□□□ -0.32
PHF1-211ENST00000495509 SCPEP1Q9HB40 452 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 MED13LQ71F56 2210 aa13.08□□□□□ -0.32
PHF1-211ENST00000495509 FCN3O75636 299 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 IGHV2-70P01814 119 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 AESQ08117 197 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 ARL6IP1Q15041 203 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 ATPAF1Q5TC12 328 aaPredicted RBP13.07□□□□□ -0.32
PHF1-211ENST00000495509 TRIQKQ629K1 86 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 C5orf24Q7Z6I8 188 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 SDSLQ96GA7 329 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 NEURL2Q9BR09 285 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 OCSTAMPQ9BR26 566 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 ZNF701Q9NV72 531 aaPredicted RBP13.07□□□□□ -0.32
PHF1-211ENST00000495509 TRAV39A0A0B4J263 110 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 H3BUI4 141 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 TMPRSS2O15393 492 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 CA11O75493 328 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 GLAP06280 429 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 RBM39Q14498 530 aaKnown RBP13.07□□□□□ -0.32
PHF1-211ENST00000495509 OR52W1Q6IF63 320 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 TPRX1Q8N7U7 411 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 SNX22Q96L94 193 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 ZNF665Q9H7R5 613 aa13.07□□□□□ -0.32
PHF1-211ENST00000495509 IGKV1D-8A0A087WSZ0 117 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 K7N7A8 449 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 PLA2G10O15496 165 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 NAPSAO96009 420 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 TK1P04183 234 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 ATP5J2P56134 94 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 TMEM33P57088 247 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 ASAH1Q13510 395 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 GRK1Q15835 563 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 ZNF57Q68EA5 555 aaPredicted RBP13.06□□□□□ -0.32
PHF1-211ENST00000495509 PEG10Q86TG7 708 aaKnown RBP13.06□□□□□ -0.32
PHF1-211ENST00000495509 ZNF561Q8N587 486 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 OR4K15Q8NH41 348 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 PERPQ96FX8 193 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 COQ2Q96H96 371 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 NAV2Q8IVL1 2488 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 VPS13CQ709C8 3753 aa13.06□□□□□ -0.32
PHF1-211ENST00000495509 ITPR2Q14571 2701 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 MALRD1Q5VYJ5 2156 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 UNC79Q9P2D8 2635 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 MEX3AA1L020 520 aaKnown RBP13.05□□□□□ -0.32
PHF1-211ENST00000495509 BOLA2-SMG1P6H3BVE0 249 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 SIGLEC5O15389 551 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 ADAM20O43506 726 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 MT-ND4P03905 459 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 FCGR3AP08637 254 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 HLA-DMAP28067 261 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 MDH2P40926 338 aaKnown RBP13.05□□□□□ -0.32
PHF1-211ENST00000495509 GLIPR1P48060 266 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 MRPS15P82914 257 aaKnown RBP13.05□□□□□ -0.32
PHF1-211ENST00000495509 ZNF497Q6ZNH5 498 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 TMEM185AQ8NFB2 350 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 MRPL30Q8TCC3 161 aaKnown RBP13.05□□□□□ -0.32
PHF1-211ENST00000495509 CCDC107Q8WV48 283 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 SNAPC3Q92966 411 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 CHMP1AQ9HD42 196 aaPredicted RBP13.05□□□□□ -0.32
PHF1-211ENST00000495509 MYOZ1Q9NP98 299 aaPredicted RBP13.05□□□□□ -0.32
PHF1-211ENST00000495509 C12orf4Q9NQ89 552 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 CTSZQ9UBR2 303 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 DSCAML1Q8TD84 2053 aa13.05□□□□□ -0.32
PHF1-211ENST00000495509 RCC1P18754 421 aaPredicted RBP13.04□□□□□ -0.32
PHF1-211ENST00000495509 INPP1P49441 399 aa13.04□□□□□ -0.32
PHF1-211ENST00000495509 IL13RA1P78552 427 aa13.04□□□□□ -0.32
PHF1-211ENST00000495509 KLF9Q13886 244 aaPredicted RBP13.04□□□□□ -0.32
PHF1-211ENST00000495509 EDDM3AQ14507 147 aa13.04□□□□□ -0.32
PHF1-211ENST00000495509 RSBN1Q5VWQ0 802 aaPredicted RBP13.04□□□□□ -0.32
PHF1-211ENST00000495509 SHEQ5VZ18 495 aa13.04□□□□□ -0.32
PHF1-211ENST00000495509 NRARPQ7Z6K4 114 aa13.04□□□□□ -0.32
PHF1-211ENST00000495509 TOMM5Q8N4H5 51 aa13.04□□□□□ -0.32
PHF1-211ENST00000495509 RAB1CQ92928 201 aa13.04□□□□□ -0.32
PHF1-211ENST00000495509 TIMD4Q96H15 378 aa13.04□□□□□ -0.32
PHF1-211ENST00000495509 NARFLQ9H6Q4 476 aa13.04□□□□□ -0.32
PHF1-211ENST00000495509 IFT46Q9NQC8 304 aa13.04□□□□□ -0.32
PHF1-211ENST00000495509 KIF25Q9UIL4 384 aa13.04□□□□□ -0.32
PHF1-211ENST00000495509 ANAPC10Q9UM13 185 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms