RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 RPL22L1Q6P5R6 122 aaKnown RBP7.7□□□□□ -1.18
MSH5-218ENST00000494646 HEPN1Q6WQI6 88 aa7.7□□□□□ -1.18
MSH5-218ENST00000494646 DTX3Q8N9I9 347 aa7.7□□□□□ -1.18
MSH5-218ENST00000494646 OR4D6Q8NGJ1 314 aa7.7□□□□□ -1.18
MSH5-218ENST00000494646 TNFAIP8L1Q8WVP5 186 aa7.7□□□□□ -1.18
MSH5-218ENST00000494646 CYGBQ8WWM9 190 aa7.7□□□□□ -1.18
MSH5-218ENST00000494646 RGP1Q92546 391 aaPredicted RBP7.7□□□□□ -1.18
MSH5-218ENST00000494646 LEAP2Q969E1 77 aa7.7□□□□□ -1.18
MSH5-218ENST00000494646 JAM3Q9BX67 310 aa7.7□□□□□ -1.18
MSH5-218ENST00000494646 FAM192AQ9GZU8 254 aa7.7□□□□□ -1.18
MSH5-218ENST00000494646 SMPD3Q9NY59 655 aaPredicted RBP7.7□□□□□ -1.18
MSH5-218ENST00000494646 TAS2R3Q9NYW6 316 aa7.7□□□□□ -1.18
MSH5-218ENST00000494646 CLEC2DQ9UHP7 191 aa7.7□□□□□ -1.18
MSH5-218ENST00000494646 SIRT4Q9Y6E7 314 aaPredicted RBP7.7□□□□□ -1.18
MSH5-218ENST00000494646 MEIKINA0A087WXM9 373 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 TRAV39A0A0B4J263 110 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 TRAV24A0A0B4J272 114 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 SH2D7A6NKC9 451 aaPredicted RBP7.69□□□□□ -1.18
MSH5-218ENST00000494646 FAM90A22PA8MWA6 464 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 LEUTXA8MZ59 168 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 H3BUI4 141 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 FBXO24O75426 580 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 LALBAP00709 142 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 IGLV1-47P01700 117 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 PTGFRP43088 359 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 VDAC2P45880 294 aaPredicted RBP7.69□□□□□ -1.18
MSH5-218ENST00000494646 OR3A4PP47883 348 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 MTNR1BP49286 362 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 DYNLT3P51808 116 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 PRRX1P54821 245 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 PIGYQ3MUY2 71 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 PAN3Q58A45 887 aaKnown RBP7.69□□□□□ -1.18
MSH5-218ENST00000494646 RTN4RL2Q86UN3 420 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 ZNF565Q8N9K5 539 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 CHST4Q8NCG5 386 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 PXT1Q8NFP0 134 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 OR13C5Q8NGS8 318 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 RFESDQ8TAC1 157 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 ZNF596Q8TC21 504 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 GPR148Q8TDV2 347 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 CITED2Q99967 270 aaPredicted RBP7.69□□□□□ -1.18
MSH5-218ENST00000494646 BARHL1Q9BZE3 327 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 MMP28Q9H239 520 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 RHOFQ9HBH0 211 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 BABAM2Q9NXR7 383 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 ZNF581Q9P0T4 197 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 KIF25Q9UIL4 384 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 NOTCH3Q9UM47 2321 aa7.69□□□□□ -1.18
MSH5-218ENST00000494646 A0A1W2PPK0 400 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 ZNF729A6NN14 1252 aaPredicted RBP7.68□□□□□ -1.18
MSH5-218ENST00000494646 BUB1B-PAK6H3BSN5 160 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 OGG1O15527 345 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 PRB2P02812 416 aaPredicted RBP7.68□□□□□ -1.18
MSH5-218ENST00000494646 CSN2P05814 226 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 CD2P06729 351 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 CGB3P0DN86 165 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 CGB7P0DN87 165 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 DCKP27707 260 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 C21orf33P30042 268 aaPredicted RBP7.68□□□□□ -1.18
MSH5-218ENST00000494646 BRS3P32247 399 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 GLP1RP43220 463 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 BDH1Q02338 343 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 EMX1Q04741 257 aaPredicted RBP7.68□□□□□ -1.18
MSH5-218ENST00000494646 HLA-DRB5Q30154 266 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 ABCA11PQ4W5N1 156 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 C9orf152Q5JTZ5 239 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 ELP2Q6IA86 826 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 ZNF529Q6P280 563 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 TMPRSS11AQ6ZMR5 421 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 CENPVQ7Z7K6 275 aaPredicted RBP7.68□□□□□ -1.18
MSH5-218ENST00000494646 Q8N2B8 174 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 ZFP41Q8N8Y5 198 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 OR5AU1Q8NGC0 362 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 OR51T1Q8NGJ9 327 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 OR13A1Q8NGR1 328 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 PLPPR1Q8TBJ4 325 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 CAPSLQ8WWF8 208 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 GGHQ92820 318 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 TMEM106AQ96A25 262 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 R3HDM4Q96D70 268 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 TMEM80Q96HE8 168 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 SLC25A33Q9BSK2 321 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 WNT10AQ9GZT5 417 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 IDI2-AS1Q9NZ38 188 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 OR6C3Q9NZP0 311 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 ST3GAL6Q9Y274 331 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 ZNF281Q9Y2X9 895 aa7.68□□□□□ -1.18
MSH5-218ENST00000494646 KBTBD11-OT1A0A1B0GTJ5 212 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 PNMA8CA0A1B0GUJ8 204 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 A0A1W2PP11 408 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 A0A1W2PPE3 182 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 A0A1W2PRX2 142 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 LY6LH3BQJ8 138 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 OPN1MWP04001 364 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 ALDOBP05062 364 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 LPLP06858 475 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 OPN1MW2P0DN77 364 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 OPN1MW3P0DN78 364 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 SERPINA2P20848 420 aa7.67□□□□□ -1.18
MSH5-218ENST00000494646 CD34P28906 385 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms