RNA–Protein interactions for RNA: ENST00000494090.6

COL27A1-207, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL27A1, Length 5,329 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-207ENST00000494090 OR5R1Q8NH85 324 aa16.82■□□□□ 0.28
COL27A1-207ENST00000494090 CHAC2Q8WUX2 184 aa16.82■□□□□ 0.28
COL27A1-207ENST00000494090 PTX4Q96A99 478 aa16.82■□□□□ 0.28
COL27A1-207ENST00000494090 PRSS27Q9BQR3 290 aa16.82■□□□□ 0.28
COL27A1-207ENST00000494090 OR2H1Q9GZK4 316 aa16.82■□□□□ 0.28
COL27A1-207ENST00000494090 ZMIZ1Q9ULJ6 1067 aa16.82■□□□□ 0.28
COL27A1-207ENST00000494090 FOXS1O43638 330 aa16.82■□□□□ 0.28
COL27A1-207ENST00000494090 OR10D4PQ8NGN7 298 aa16.82■□□□□ 0.28
COL27A1-207ENST00000494090 R3HDM4Q96D70 268 aa16.82■□□□□ 0.28
COL27A1-207ENST00000494090 GPR35Q9HC97 309 aa16.82■□□□□ 0.28
COL27A1-207ENST00000494090 DYNLT3P51808 116 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 Q1RN00 199 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 SLC25A40Q8TBP6 338 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 ERGP11308 486 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 WDR73Q6P4I2 378 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 RASL11BQ9BPW5 248 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 GEMIN2O14893 280 aaKnown RBP16.81■□□□□ 0.28
COL27A1-207ENST00000494090 TMPRSS2O15393 492 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 DCAF10Q5QP82 559 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 SSX7Q7RTT5 188 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 C9orf40Q8IXQ3 194 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 TECRQ9NZ01 308 aaKnown RBP16.81■□□□□ 0.28
COL27A1-207ENST00000494090 KCNMB2Q9Y691 235 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 CENPVL1A0A0U1RR11 272 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 HLA-GP17693 338 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 TFF2Q03403 129 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 PNRC1Q12796 327 aaPredicted RBP16.81■□□□□ 0.28
COL27A1-207ENST00000494090 IQCJQ1A5X6 159 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 OR5A2Q8NGI9 324 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 PRR13Q9NZ81 148 aa16.81■□□□□ 0.28
COL27A1-207ENST00000494090 SIRT4Q9Y6E7 314 aaPredicted RBP16.81■□□□□ 0.28
COL27A1-207ENST00000494090 SYNGR2O43760 224 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 LIFP15018 202 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 VDAC1P21796 283 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 RPS4Y1P22090 263 aaKnown RBP16.8■□□□□ 0.28
COL27A1-207ENST00000494090 ZNF788Q6ZQV5 615 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 OR2M3Q8NG83 312 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 SEC11CQ9BY50 192 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 ALX4Q9H161 411 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-207ENST00000494090 DTX4Q9Y2E6 619 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 TEX50A0A1B0GTY4 177 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 MNX1P50219 401 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-207ENST00000494090 C11orf42Q8N5U0 333 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 MED19A0JLT2 244 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-207ENST00000494090 OR2T8A6NH00 312 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 F5H697 171 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 ZNF721Q8TF20 911 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 NAT8BQ9UHF3 227 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 COX19Q49B96 90 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 MANBALQ9NQG1 85 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 PRNDQ9UKY0 176 aa16.8■□□□□ 0.28
COL27A1-207ENST00000494090 DOCK5Q9H7D0 1870 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 C16orf97H3BN30 126 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 TCAPO15273 167 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 LIMS1P48059 325 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 TSPO2Q5TGU0 170 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 LOXL4Q96JB6 756 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 SLC25A22Q9H936 323 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 TMEM38BQ9NVV0 291 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 LY75O60449 1722 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 PPYP01298 95 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 IGF2P01344 180 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 EFNB2P52799 333 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 LYZP61626 148 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 FBXW9Q5XUX1 488 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 A0A1W2PQF6 199 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 IGKV1D-16P01601 117 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 CCL3P10147 92 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 LRRC3BQ96PB8 259 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 VAMP8Q9BV40 100 aa16.79■□□□□ 0.28
COL27A1-207ENST00000494090 ID4P47928 161 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 PRSS12P56730 875 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 NANOS3P60323 173 aaKnown RBP16.78■□□□□ 0.28
COL27A1-207ENST00000494090 ZXDAP98168 799 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 ZNF345Q14585 488 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 MOGAT3Q86VF5 341 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 PDPNQ86YL7 162 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 TGIF2LYQ8IUE0 185 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 TGIF2LXQ8IUE1 241 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 NFAM1Q8NET5 270 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-207ENST00000494090 CHST5Q9GZS9 411 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 ZPLD1Q8TCW7 415 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 RP1L1Q8IWN7 2480 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-207ENST00000494090 IGKV1-8A0A0C4DH67 115 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 BCL3P20749 454 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 RPEL1Q2QD12 228 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 ZNF441Q8N8Z8 693 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 MRPL24Q96A35 216 aaKnown RBP16.78■□□□□ 0.28
COL27A1-207ENST00000494090 GCM2O75603 506 aaPredicted RBP16.78■□□□□ 0.28
COL27A1-207ENST00000494090 OPN1MWP04001 364 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 OPN1MW2P0DN77 364 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 OPN1MW3P0DN78 364 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 CSRP3P50461 194 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 UBE2L3P68036 154 aaKnown RBP16.78■□□□□ 0.28
COL27A1-207ENST00000494090 ZP4Q12836 540 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 ADAD2Q8NCV1 583 aaKnown RBP16.78■□□□□ 0.28
COL27A1-207ENST00000494090 DIRC2Q96SL1 478 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 NAT8Q9UHE5 227 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 QSER1Q2KHR3 1735 aa16.78■□□□□ 0.28
COL27A1-207ENST00000494090 CHST1O43916 411 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms