RNA–Protein interactions for RNA: ENST00000493711.1

SNX17-208, Transcript of sorting nexin 17, humanhuman

TSL 3

Gene SNX17, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-208ENST00000493711 USF3Q68DE3 2245 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 MTORP42345 2549 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 TRAV18A0A075B6X5 111 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 A0A0A6YYD4 124 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 IGHV4-61A0A0C4DH41 118 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 A0A1W2PPH5 198 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 TMEM82A0PJX8 343 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 TMEM30CPA0ZSE6 113 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 A8MXK9 166 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 PSPNO60542 156 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 FOXH1O75593 365 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 EIF4EP06730 217 aaKnown RBP10.33□□□□□ -0.76
SNX17-208ENST00000493711 NDUFB7P17568 137 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 CDK2P24941 298 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 PTBP1P26599 531 aaKnown RBP eCLIP10.33□□□□□ -0.76
SNX17-208ENST00000493711 TNFSF8P32971 234 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 OR3A1P47881 315 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 CEBPDP49716 269 aaPredicted RBP10.33□□□□□ -0.76
SNX17-208ENST00000493711 TMEM50BP56557 158 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 GNB2P62879 340 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 MEF2CQ06413 473 aaPredicted RBP10.33□□□□□ -0.76
SNX17-208ENST00000493711 PLA2G7Q13093 441 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 CDNFQ49AH0 187 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 WDR25Q64LD2 544 aaPredicted RBP10.33□□□□□ -0.76
SNX17-208ENST00000493711 SLC35E4Q6ICL7 350 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 ZNF841Q6ZN19 808 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 C17orf107Q6ZR85 190 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 KRTAP1-3Q8IUG1 177 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 ZNRF1Q8ND25 227 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 C1orf159Q96HA4 380 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 DIRAS2Q96HU8 199 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 SSBP3Q9BWW4 388 aaPredicted RBP10.33□□□□□ -0.76
SNX17-208ENST00000493711 PECRQ9BY49 303 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 SHARPINQ9H0F6 387 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 NARFLQ9H6Q4 476 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 RAB9BQ9NP90 201 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 ETAA1Q9NY74 926 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 MGAT4AQ9UM21 535 aa10.33□□□□□ -0.76
SNX17-208ENST00000493711 MELTFP08582 738 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 CD3GP09693 182 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 RBMXP38159 391 aaKnown RBP10.32□□□□□ -0.76
SNX17-208ENST00000493711 P2RX3P56373 397 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 MRPS10P82664 201 aaKnown RBP10.32□□□□□ -0.76
SNX17-208ENST00000493711 PDCD1Q15116 288 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 SPANXN2Q5MJ10 180 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 HACD4Q5VWC8 232 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 CNIH2Q6PI25 160 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 TRAT1Q6PIZ9 186 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 MOB1BQ7L9L4 216 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 C6orf201Q7Z4U5 140 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 LAX1Q8IWV1 398 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 OR4S1Q8NGB4 309 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 OR6Q1Q8NGQ2 317 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 ST8SIA4Q92187 359 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 ARHGAP5-AS1Q96IT6 56 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 PPA2Q9H2U2 334 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 MIXL1Q9H2W2 232 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 AUNIPQ9H7T9 357 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 C12orf4Q9NQ89 552 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 OR6C3Q9NZP0 311 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 EXTL2Q9UBQ6 330 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 CTSZQ9UBR2 303 aa10.32□□□□□ -0.76
SNX17-208ENST00000493711 POLR3KQ9Y2Y1 108 aaPredicted RBP10.32□□□□□ -0.76
SNX17-208ENST00000493711 LOC105371242A0A075B767 164 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 PPIAL4CA0A0B4J2A2 164 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 hADV38S2A0JD32 116 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 UBE2QL1A1L167 161 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 B4DSR2 109 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 MFNGO00587 321 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 LIPFP07098 398 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 CBX5P45973 191 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 GZMKP49863 264 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 TAS2R20P59543 309 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 GNG2P59768 71 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 ARFRP1Q13795 201 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 MOGAT2Q3SYC2 334 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 ZNF260Q3ZCT1 412 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 PLAC9Q5JTB6 97 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 KRBOX4Q5JUW0 171 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 PYHIN1Q6K0P9 492 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 ZNF497Q6ZNH5 498 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 ZNF554Q86TJ5 538 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 BIVMQ86UB2 503 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 GAPTQ8N292 157 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 BPIFB2Q8N4F0 458 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 ZNF565Q8N9K5 539 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 WFDC11Q8NEX6 87 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 OR4M1Q8NGD0 313 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 C8orf46Q8TAG6 207 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 CMSS1Q9BQ75 279 aaKnown RBP10.31□□□□□ -0.76
SNX17-208ENST00000493711 SULT4A1Q9BR01 284 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 DCTN5Q9BTE1 182 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 FAAP24Q9BTP7 215 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 CHST6Q9GZX3 395 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 SCPEP1Q9HB40 452 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 ITGB1BP2Q9UKP3 347 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 AKAP6Q13023 2319 aa10.31□□□□□ -0.76
SNX17-208ENST00000493711 A0A096LNT2 108 aa10.3□□□□□ -0.76
SNX17-208ENST00000493711 TRGV10A0A0A0MS01 117 aa10.3□□□□□ -0.76
SNX17-208ENST00000493711 TRBV6-6A0A0A6YYG2 114 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms