RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 SCGB1C1Q8TD33 95 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 NELFBQ8WX92 580 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 ZNF75CPQ92670 426 aaPredicted RBP1.45□□□□□ -2.18
SMC4-223ENST00000493695 LRRC39Q96DD0 335 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 PITX2Q99697 317 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 HINT2Q9BX68 163 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 BEX2Q9BXY8 128 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 OR5V1Q9UGF6 321 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 U3KQK5 164 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 MYO15BQ96JP2 1530 aa1.45□□□□□ -2.18
SMC4-223ENST00000493695 CEP170Q5SW79 1584 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 SDHAF1A6NFY7 115 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 MGAT4DA6NG13 374 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 M0QXV9 152 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 SPOPO43791 374 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 SHOX2O60902 331 aaPredicted RBP1.44□□□□□ -2.18
SMC4-223ENST00000493695 SLC2A1P11166 492 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 CCL2P13500 99 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 CCNOP22674 350 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 TSPAN5P62079 268 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 BCL2A1Q16548 175 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 LGALSLQ3ZCW2 172 aaPredicted RBP1.44□□□□□ -2.18
SMC4-223ENST00000493695 LAMTOR1Q6IAA8 161 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 TMEM25Q86YD3 366 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 RBM45Q8IUH3 476 aaKnown RBP1.44□□□□□ -2.18
SMC4-223ENST00000493695 CDRT4Q8N9R6 151 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 OR8G5Q8NG78 346 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 CMBLQ96DG6 245 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 ZMYND19Q96E35 227 aaPredicted RBP1.44□□□□□ -2.18
SMC4-223ENST00000493695 C20orf166-AS1Q96NR2 134 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 LINC01587Q99440 93 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 HIGD2AQ9BW72 106 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 METTL8Q9H825 291 aaKnown RBP1.44□□□□□ -2.18
SMC4-223ENST00000493695 MAT2BQ9NZL9 334 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 NXT1Q9UKK6 140 aaKnown RBP1.44□□□□□ -2.18
SMC4-223ENST00000493695 USH1CQ9Y6N9 552 aa1.44□□□□□ -2.18
SMC4-223ENST00000493695 BAHCC1Q9P281 2608 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 TRBV24-1A0A075B6N3 115 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 OR5H14A6NHG9 310 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 FAM183AA6NL82 134 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 NDUFS8O00217 210 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 PSMD11O00231 422 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 ZNF73O43830 326 aaPredicted RBP1.43□□□□□ -2.18
SMC4-223ENST00000493695 CST4P01036 141 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 NUP62P37198 522 aaPredicted RBP1.43□□□□□ -2.18
SMC4-223ENST00000493695 RANBP1P43487 201 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 KCNJ3P48549 501 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 PSMD8P48556 350 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 VSNL1P62760 191 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 CD164Q04900 197 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 CEACAM21Q3KPI0 293 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 PYCR3Q53H96 274 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 FAM162BQ5T6X4 162 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 HBMQ6B0K9 141 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 CLEC20AQ6ZU45 233 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 KRTCAP2Q8N6L1 136 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 OR5P2Q8WZ92 322 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 MSANTD3Q96H12 275 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 SLC25A31Q9H0C2 315 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 LINC00588Q9Y4M8 146 aa1.43□□□□□ -2.18
SMC4-223ENST00000493695 CACNA1GO43497 2377 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 F8VP50 259 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 H3BP45 60 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 PSIP1O75475 530 aaKnown RBP1.42□□□□□ -2.18
SMC4-223ENST00000493695 GPR75O95800 540 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 GIMD1P0DJR0 217 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 PSKH1P11801 424 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 FAM183BPQ6ZVS7 135 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 HS3ST5Q8IZT8 346 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 PHOSPHO2Q8TCD6 241 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 CASTOR1Q8WTX7 329 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 TWIST2Q8WVJ9 160 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 STACQ99469 402 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 ANAPC13Q9BS18 74 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 TSSK6Q9BXA6 273 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 PRRG3Q9BZD7 231 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 ULBP1Q9BZM6 244 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 GOLPH3Q9H4A6 298 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 TMBIM4Q9HC24 238 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 SHANK3Q9BYB0 1731 aa1.42□□□□□ -2.18
SMC4-223ENST00000493695 KMT2EQ8IZD2 1858 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 A0A1B0GTI1 187 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 J3QKU1 62 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 LECT2O14960 151 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 UBDO15205 165 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 CTSGP08311 255 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 CCDC172P0C7W6 258 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 CRABP2P29373 138 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 RPA3P35244 121 aaPredicted RBP1.41□□□□□ -2.18
SMC4-223ENST00000493695 COILP38432 576 aaPredicted RBP1.41□□□□□ -2.18
SMC4-223ENST00000493695 MAGEA3P43357 314 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 HBG1P69891 147 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 HBG2P69892 147 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 PRDX1Q06830 199 aaKnown RBP1.41□□□□□ -2.18
SMC4-223ENST00000493695 TRAM1Q15629 374 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 C10orf91Q5T1B1 145 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 NXNL2Q5VZ03 156 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 ELP2Q6IA86 826 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 LAIR2Q6ISS4 152 aa1.41□□□□□ -2.18
SMC4-223ENST00000493695 SSX6Q7RTT6 188 aa1.41□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms