RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 ZNF146Q15072 292 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 KCNJ8Q15842 424 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 MPV17LQ2QL34 196 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 NHLRC3Q5JS37 347 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 NKAPLQ5M9Q1 402 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 RAB12Q6IQ22 244 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 CNIH2Q6PI25 160 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 LYPD2Q6UXB3 125 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 Q6ZTK2 550 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 LINC00596Q86U02 117 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 IZUMO1Q8IYV9 350 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 SIGLECL1Q8N7X8 197 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 OR4M1Q8NGD0 313 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 OR8B3Q8NGG8 313 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 OR10R2Q8NGX6 335 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 GCDHQ92947 438 aaPredicted RBP11.31□□□□□ -0.6
CDK9-204ENST00000491521 NEIL1Q96FI4 390 aaPredicted RBP11.31□□□□□ -0.6
CDK9-204ENST00000491521 DUX5Q96PT3 197 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 OR8B2Q96RD0 313 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 JMJD8Q96S16 334 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 TM2D1Q9BX74 207 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 ESM1Q9NQ30 184 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 ZNF69Q9UC07 566 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 MIOXQ9UGB7 285 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 INSIG2Q9Y5U4 225 aa11.31□□□□□ -0.6
CDK9-204ENST00000491521 A0A0A6YYD4 124 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 PPIAL4CA0A0B4J2A2 164 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A10PA6NDY2 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A18PA6NE21 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A16PA6NEW6 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FABP12A6NFH5 140 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A20PA6NIJ5 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A8PA6NJQ4 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A7PA6NKC0 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A22PA8MWA6 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A12PA8MX19 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A5PA8MXJ8 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A23PA8MXZ1 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FSHBP01225 129 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A15PP0C7V4 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A13PP0C7W8 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A14PP0C7W9 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM90A24PP0C7X0 464 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FUT3P21217 361 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 CDK2P24941 298 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 MOGAT2Q3SYC2 334 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 SPANXN2Q5MJ10 180 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 TMEM69Q5SWH9 247 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 TEX36Q5VZQ5 186 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 BRICD5Q6PL45 260 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM131AQ6UXB0 335 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 BTNL3Q6UXE8 466 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 RBMS3Q6XE24 437 aaKnown RBP11.3□□□□□ -0.6
CDK9-204ENST00000491521 NLRC3Q7RTR2 1065 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 BCL6BQ8N143 479 aaPredicted RBP11.3□□□□□ -0.6
CDK9-204ENST00000491521 FAM89BQ8N5H3 189 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 NEK7Q8TDX7 302 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 RAB3CQ96E17 227 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 CCL13Q99616 98 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 PLEKHJ1Q9NW61 149 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 NUP50Q9UKX7 468 aa11.3□□□□□ -0.6
CDK9-204ENST00000491521 IGKV1D-17A0A075B6S4 117 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 A0A0A6YYH2 397 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 UBE2QL1A1L167 161 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 NKX6-3A6NJ46 265 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 A6NJ64 397 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 A8MXK9 166 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 MCRIP1C9JLW8 97 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 HSPB6O14558 160 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 XRCC3O43542 346 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 OR2H2O95918 312 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 MNDAP41218 407 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 COL10A1Q03692 680 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 IL18Q14116 193 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 CDNFQ49AH0 187 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 KLF17Q5JT82 389 aaPredicted RBP11.29□□□□□ -0.6
CDK9-204ENST00000491521 Q6P435 159 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 C6orf201Q7Z4U5 140 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 CD177Q8N6Q3 437 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 ASCC1Q8N9N2 400 aaKnown RBP11.29□□□□□ -0.6
CDK9-204ENST00000491521 ANGPTL6Q8NI99 470 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 FAM216AQ8WUB2 273 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 ZFAND2BQ8WV99 257 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 ARHGAP5-AS1Q96IT6 56 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 WDFY2Q96P53 400 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 ZMAT3Q9HA38 289 aaKnown RBP11.29□□□□□ -0.6
CDK9-204ENST00000491521 SPACA1Q9HBV2 294 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 ZNF581Q9P0T4 197 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 CLN8Q9UBY8 286 aa11.29□□□□□ -0.6
CDK9-204ENST00000491521 POLR3KQ9Y2Y1 108 aaPredicted RBP11.29□□□□□ -0.6
CDK9-204ENST00000491521 IGHV2-70DA0A0C4DH43 119 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 RAB27BO00194 218 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 TMPRSS2O15393 492 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 ADAM20O43506 726 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 NDUFA2O43678 99 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 PDCD6O75340 191 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 IGHV4-38-2P0DP08 117 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 GNB3P16520 340 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 TMEM50BP56557 158 aa11.28□□□□□ -0.6
CDK9-204ENST00000491521 TAS2R20P59543 309 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms