RNA–Protein interactions for RNA: ENST00000490699.1

VARS2-210, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 3

Gene VARS2, Length 719 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-210ENST00000490699 HOXA4Q00056 320 aaPredicted RBP9.12□□□□□ -0.95
VARS2-210ENST00000490699 CDNFQ49AH0 187 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 C6orf183Q5T699 404 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 PYHIN1Q6K0P9 492 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 TRAT1Q6PIZ9 186 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 LYPD2Q6UXB3 125 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 DNM1P46Q6ZS02 220 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 MOB1BQ7L9L4 216 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 BPIFB2Q8N4F0 458 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 ZNF565Q8N9K5 539 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 OR4M1Q8NGD0 313 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 OR6Q1Q8NGQ2 317 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 SETD6Q8TBK2 473 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 REG4Q9BYZ8 158 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 IFT46Q9NQC8 304 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 ING3Q9NXR8 418 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 OR6C3Q9NZP0 311 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 TRAPPC2LQ9UL33 140 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 MAB21L2Q9Y586 359 aa9.12□□□□□ -0.95
VARS2-210ENST00000490699 SPG11Q96JI7 2443 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 MEIKINA0A087WXM9 373 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 A0A0A6YYD4 124 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 RNF223E7ERA6 249 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 F5H0A9 414 aaPredicted RBP9.11□□□□□ -0.95
VARS2-210ENST00000490699 ENSAO43768 121 aaKnown RBP9.11□□□□□ -0.95
VARS2-210ENST00000490699 ZNF737O75373 536 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 WNT2P09544 360 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 ERP29P30040 261 aaKnown RBP9.11□□□□□ -0.95
VARS2-210ENST00000490699 INPP1P49441 399 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 P2RX3P56373 397 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 RPL31P62899 125 aaKnown RBP9.11□□□□□ -0.95
VARS2-210ENST00000490699 ZNF45Q02386 682 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 LOXL1Q08397 574 aaPredicted RBP9.11□□□□□ -0.95
VARS2-210ENST00000490699 PLA2G7Q13093 441 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 PYDC2Q56P42 97 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 HACD4Q5VWC8 232 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 WDR25Q64LD2 544 aaPredicted RBP9.11□□□□□ -0.95
VARS2-210ENST00000490699 SLC35E4Q6ICL7 350 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 BTNL3Q6UXE8 466 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 SNX29P2Q8IUI4 249 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 IZUMO1Q8IYV9 350 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 FAM185AQ8N0U4 392 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 OR4S1Q8NGB4 309 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 SULT4A1Q9BR01 284 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 FAAP24Q9BTP7 215 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 MIXL1Q9H2W2 232 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 GAL3ST2Q9H3Q3 398 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 ZMAT3Q9HA38 289 aaKnown RBP9.11□□□□□ -0.95
VARS2-210ENST00000490699 SCPEP1Q9HB40 452 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.11□□□□□ -0.95
VARS2-210ENST00000490699 UNC79Q9P2D8 2635 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 ABCA12Q86UK0 2595 aa9.11□□□□□ -0.95
VARS2-210ENST00000490699 NAV2Q8IVL1 2488 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 FLNBO75369 2602 aaKnown RBP9.1□□□□□ -0.95
VARS2-210ENST00000490699 LOC105371242A0A075B767 164 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 IGHV4-61A0A0C4DH41 118 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 KIR2DS1A0A191URI9 304 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 TMEM82A0PJX8 343 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 ODAMA1E959 279 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 TMEM235A6NFC5 223 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 B4DSR2 109 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 SULT1C2O00338 296 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 MFNGO00587 321 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 PSPNO60542 156 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 TFF1P04155 84 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 LPLP06858 475 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 LIPFP07098 398 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 RBMXP38159 391 aaKnown RBP9.1□□□□□ -0.95
VARS2-210ENST00000490699 GLP1RP43220 463 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 KIR2DS4P43632 304 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 GZMKP49863 264 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 ACTBP60709 375 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 ACTG1P63261 375 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 PAX5Q02548 391 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 MEF2CQ06413 473 aaPredicted RBP9.1□□□□□ -0.95
VARS2-210ENST00000490699 AESQ08117 197 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 KIR2DS1Q14954 304 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 MOGAT2Q3SYC2 334 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 SIGIRRQ6IA17 410 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 BRICD5Q6PL45 260 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 C17orf107Q6ZR85 190 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 FCAMRQ8WWV6 532 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 WDR12Q9GZL7 423 aaKnown RBP9.1□□□□□ -0.95
VARS2-210ENST00000490699 NCOR1P1Q9H4R4 102 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 AUNIPQ9H7T9 357 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 CTSZQ9UBR2 303 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 AK3Q9UIJ7 227 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 KIF25Q9UIL4 384 aa9.1□□□□□ -0.95
VARS2-210ENST00000490699 APCP25054 2843 aa9.09□□□□□ -0.95
VARS2-210ENST00000490699 FBN2P35556 2912 aa9.09□□□□□ -0.95
VARS2-210ENST00000490699 FOXI3A8MTJ6 420 aaPredicted RBP9.09□□□□□ -0.95
VARS2-210ENST00000490699 TNFRSF13BO14836 293 aaPredicted RBP9.09□□□□□ -0.95
VARS2-210ENST00000490699 SPINT2O43291 252 aa9.09□□□□□ -0.95
VARS2-210ENST00000490699 SELLP14151 372 aa9.09□□□□□ -0.95
VARS2-210ENST00000490699 GZMHP20718 246 aa9.09□□□□□ -0.95
VARS2-210ENST00000490699 DTYMKP23919 212 aa9.09□□□□□ -0.95
VARS2-210ENST00000490699 TMEM50BP56557 158 aa9.09□□□□□ -0.95
VARS2-210ENST00000490699 ZNF846Q147U1 533 aa9.09□□□□□ -0.95
VARS2-210ENST00000490699 ZNF260Q3ZCT1 412 aa9.09□□□□□ -0.95
VARS2-210ENST00000490699 PLAC9Q5JTB6 97 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 133.6 ms