RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 ZNF726A6NNF4 738 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 UBFD1O14562 309 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 AZIN1O14977 448 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 LSM8O95777 96 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 TDGF1P13385 188 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 RCC1P18754 421 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 OR1E1P30953 314 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 GGT2P36268 569 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 MAGEA3P43357 314 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 RPL34P49207 117 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 CDC34P49427 236 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 SRP9P49458 86 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 IDH3GP51553 393 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 TDGF1P3P51864 188 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 PLK1P53350 603 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 CEBPGP53567 150 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 RPL18AQ02543 176 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF235Q14590 738 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 SNRNP35Q16560 246 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 LCE1AQ5T7P2 110 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 OLFML2AQ68BL7 652 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 SLC35E4Q6ICL7 350 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ABHD13Q7L211 337 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ACOT1Q86TX2 421 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF738Q8NE65 137 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 OR1J4Q8NGS1 313 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 C11orf45Q8TAV5 145 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF596Q8TC21 504 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ACER1Q8TDN7 264 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 OR8D1Q8WZ84 308 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 OR4K3Q96R72 315 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF471Q9BX82 626 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 RPS10P5Q9NQ39 176 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 RASL12Q9NYN1 266 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 TAS2R16Q9NYV7 291 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 MUC22E2RYF6 1773 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 A0A0G2JRQ6 117 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 COLCA2A8K830 154 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 HMSDA8MTL9 139 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 SULT2B1O00204 365 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 BMPR1BO00238 502 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF593O00488 134 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 MPZL2O60487 215 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 CREBL2O60519 120 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 CTNSO60931 367 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 SC5DO75845 299 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 YIF1AO95070 293 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 HBE1P02100 147 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 THY1P04216 161 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 PRSS1P07477 247 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 PSG1P11464 419 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 RAB5AP20339 215 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 MIPP30301 263 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 CD200P41217 278 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 EVX1P49640 407 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 DAPP51397 102 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 CRISP1P54107 249 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 DLX5P56178 289 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 CTBP2P56545 445 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 DSCR9P59020 149 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 SNRPFP62306 86 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 DCDP81605 110 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 SLC25A11Q02978 314 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ARL16Q0P5N6 197 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 SLC10A1Q14973 349 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 SSX1Q16384 188 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 PAGE3Q5JUK9 113 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 SLC22A10Q63ZE4 541 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 LEMD1Q68G75 181 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF660Q6AZW8 331 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 EIF5AL1Q6IS14 154 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 APOOLQ6UXV4 268 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 TMEM179BQ7Z7N9 219 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 LRRTM1Q86UE6 522 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 THOC6Q86W42 341 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 TMEM104Q8NE00 496 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 OR8J3Q8NGG0 315 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 OR5AR1Q8NGP9 310 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 OR6K3Q8NGY3 331 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 TWIST2Q8WVJ9 160 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 PIH1D2Q8WWB5 315 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 PYURFQ96I23 114 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF354BQ96LW1 612 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 GPR22Q99680 433 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF2Q9BSG1 426 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 CABLES2Q9BTV7 478 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 TMED9Q9BVK6 235 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 CDCA4Q9BXL8 241 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 SEC11CQ9BY50 192 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ZBP1Q9H171 429 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ISYNA1Q9NPH2 558 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 TXNL4BQ9NX01 149 aaKnown RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ZNF223Q9UK11 482 aaPredicted RBP2.26□□□□□ -2.05
UBXN4-208ENST00000490163 RNF24Q9Y225 148 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ASF1AQ9Y294 204 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 EVPLQ92817 2033 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 IGHV4-4A0A075B6R2 117 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 IGHV1OR15-1A0A075B7D0 117 aa2.26□□□□□ -2.05
UBXN4-208ENST00000490163 ERI2A8K979 691 aaKnown RBP2.26□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms