RNA–Protein interactions for RNA: ENST00000487017.5

COL7A1-210, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 5,807 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-210ENST00000487017 SULT1A1P50225 295 aa14.45□□□□□ -0.1
COL7A1-210ENST00000487017 SMUG1Q53HV7 270 aa14.45□□□□□ -0.1
COL7A1-210ENST00000487017 WDR73Q6P4I2 378 aa14.45□□□□□ -0.1
COL7A1-210ENST00000487017 BTNL3Q6UXE8 466 aa14.45□□□□□ -0.1
COL7A1-210ENST00000487017 TNFRSF19Q9NS68 423 aa14.45□□□□□ -0.1
COL7A1-210ENST00000487017 MRPS18BQ9Y676 258 aaKnown RBP14.45□□□□□ -0.1
COL7A1-210ENST00000487017 CDS2O95674 445 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 VSIG10L2P0DP72 767 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 DLK1P80370 383 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 OR2T10Q8NGZ9 312 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 OR2H1Q9GZK4 316 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 CCL28Q9NRJ3 127 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 NPTNQ9Y639 398 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 DSPPQ9NZW4 1301 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 FOXS1O43638 330 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 CXCL2P19875 107 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 LYZL2Q7Z4W2 148 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 OR2Y1Q8NGV0 311 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 CLEC1BQ9P126 229 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 GATCO43716 136 aaKnown RBP14.44□□□□□ -0.1
COL7A1-210ENST00000487017 OR4F17Q8NGA8 305 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 LHFPL5Q8TAF8 219 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 RAB33BQ9H082 229 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 GAL3ST2Q9H3Q3 398 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 LHX9Q9NQ69 397 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 IGHV3-13P01766 116 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 IGHV3-7P01780 117 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 OR6S1Q8NH40 331 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 KLK10O43240 276 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 CSRP3P50461 194 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 ZNF721Q8TF20 911 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 PRSS50Q9UI38 385 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 VAX2Q9UIW0 290 aa14.44□□□□□ -0.1
COL7A1-210ENST00000487017 A0A1W2PPC1 479 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 OOEPA6NGQ2 149 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 SMIM6P0DI80 62 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 R3HDM4Q96D70 268 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 OR6C3Q9NZP0 311 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 IGKV1-8A0A0C4DH67 115 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 ASAH2BP0C7U1 165 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 SEC11BP0C7V7 166 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 ERGP11308 486 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 PNLIPP16233 465 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 RPS4Y1P22090 263 aaKnown RBP14.43□□□□□ -0.1
COL7A1-210ENST00000487017 SPINK14Q6IE38 97 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 TCTEX1D1Q8N7M0 179 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 GPR87Q9BY21 358 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 MSL2Q9HCI7 577 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 DOK5Q9P104 306 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 NKX2-6A6NCS4 301 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 MPV17LQ2QL34 196 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 OR2M3Q8NG83 312 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 OR4S2Q8NH73 311 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 IL36GQ9NZH8 169 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 QSER1Q2KHR3 1735 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 CRYBA1P05813 215 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 KLF3P57682 345 aaPredicted RBP14.43□□□□□ -0.1
COL7A1-210ENST00000487017 PIGYQ3MUY2 71 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 SIRT7Q9NRC8 400 aa14.43□□□□□ -0.1
COL7A1-210ENST00000487017 HLA-DQB1P01920 261 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 PMELP40967 661 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 FUT5Q11128 374 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 NPAS1Q99742 590 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 hADV38S2A0JD32 116 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 C11orf94C9JXX5 98 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 C5orf67F2Z3F1 127 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 TNFAIP6P98066 277 aaPredicted RBP14.42□□□□□ -0.1
COL7A1-210ENST00000487017 PRSS53Q2L4Q9 553 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 FNDC7Q5VTL7 733 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 ADTRPQ96IZ2 230 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 F5P12259 2224 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 TRAV34A0A0B4J273 112 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 A0A1W2PN81 502 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 ZNF205O95201 554 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 TTRP02766 147 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 SP1P08047 785 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 FSTP19883 344 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 SPINK2P20155 84 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 COX7A1P24310 79 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 NHLH1Q02575 133 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 NHLH2Q02577 135 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 MGAT2Q10469 447 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 TMEM65Q6PI78 240 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 DHRS13Q6UX07 377 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 DTD1Q8TEA8 209 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 RBM14Q96PK6 669 aaKnown RBP14.42□□□□□ -0.1
COL7A1-210ENST00000487017 STRCP1A6NGW2 1772 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 FAM90A27PA6NNH2 459 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 MPLP40238 635 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 TUSC1Q2TAM9 212 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 TUSC5Q8IXB3 177 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 CT55Q8WUE5 264 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 IL22RA2Q969J5 263 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 RPEQ96AT9 228 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 PPIHO43447 177 aaKnown RBP14.42□□□□□ -0.1
COL7A1-210ENST00000487017 DCAF12L2Q5VW00 463 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 CD200R1LQ6Q8B3 271 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 CCL17Q92583 94 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 CRISPLD2Q9H0B8 497 aa14.42□□□□□ -0.1
COL7A1-210ENST00000487017 TMEM167BQ9NRX6 74 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms