RNA–Protein interactions for RNA: ENST00000486901.1

HSPG2-211, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 3,586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-211ENST00000486901 GFOD1Q9NXC2 390 aa10.71□□□□□ -0.69
HSPG2-211ENST00000486901 MYOTQ9UBF9 498 aa10.71□□□□□ -0.69
HSPG2-211ENST00000486901 IGKV1D-13A0A0B4J2D9 117 aa10.71□□□□□ -0.7
HSPG2-211ENST00000486901 ZNF729A6NN14 1252 aaPredicted RBP10.71□□□□□ -0.7
HSPG2-211ENST00000486901 TLX3O43711 291 aaPredicted RBP10.71□□□□□ -0.7
HSPG2-211ENST00000486901 IGKV1-13P0DP09 117 aa10.71□□□□□ -0.7
HSPG2-211ENST00000486901 STX12Q86Y82 276 aa10.71□□□□□ -0.7
HSPG2-211ENST00000486901 GTF3C1Q12789 2109 aa10.71□□□□□ -0.7
HSPG2-211ENST00000486901 A0A087WZY1 265 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 DUX1O43812 170 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 SRP19P09132 144 aaKnown RBP10.7□□□□□ -0.7
HSPG2-211ENST00000486901 NTF4P34130 210 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 APLNRP35414 380 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 RAB30Q15771 203 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 ZNF501Q96CX3 271 aaPredicted RBP10.7□□□□□ -0.7
HSPG2-211ENST00000486901 PRDM13Q9H4Q3 707 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 LRFN1Q9P244 771 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 ANAPC10Q9UM13 185 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 USF3Q68DE3 2245 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 A0A087X0M5 115 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 A0A096LPE4 126 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 IGHV1OR15-9A0A0B4J2B8 117 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 A0A1B0GX30 115 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 A0A1W2PPZ6 126 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 ZNF587BE7ETH6 402 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 HS3ST1O14792 307 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 SCRG1O75711 98 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 PPYP01298 95 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 G0S2P27469 103 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 GALNSP34059 522 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 ERVS71-1P61550 626 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 GRB2P62993 217 aaKnown RBP10.7□□□□□ -0.7
HSPG2-211ENST00000486901 ZXDAP98168 799 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 ICAM4Q14773 271 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 RTP5Q14D33 572 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 PLXDC1Q8IUK5 500 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 LYPD6BQ8NI32 183 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 RASL10BQ96S79 203 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 LILRA5A6NI73 299 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 FOXI3A8MTJ6 420 aaPredicted RBP10.7□□□□□ -0.7
HSPG2-211ENST00000486901 DHHO43323 396 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 ZNF818PQ6ZRF7 136 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 OR6X1Q8NH79 312 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 RHBDD1Q8TEB9 315 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 MOB1AQ9H8S9 216 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 CRIM1Q9NZV1 1036 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 FBLN5Q9UBX5 448 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 DMRT1Q9Y5R6 373 aa10.7□□□□□ -0.7
HSPG2-211ENST00000486901 NRASP01111 189 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 METTL15P1P0C7V9 234 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 ZNF32P17041 273 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 ZNF92Q03936 586 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 COL13A1Q5TAT6 717 aaPredicted RBP10.69□□□□□ -0.7
HSPG2-211ENST00000486901 RDH5Q92781 318 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 RPUSD4Q96CM3 377 aaKnown RBP10.69□□□□□ -0.7
HSPG2-211ENST00000486901 FAM210BQ96KR6 192 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 A0A0G2JRQ6 117 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 CEBPZOSA8MTT3 80 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 MPPED1O15442 326 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 CCL3P10147 92 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 PTGDSP41222 190 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 RBP2P50120 134 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 ADIRFQ15847 76 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 SLC25A45Q8N413 288 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 OR2M3Q8NG83 312 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 MRGPRX4Q96LA9 322 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 ZNF286AQ9HBT8 521 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 TREM2Q9NZC2 230 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 FOXD3Q9UJU5 478 aaPredicted RBP10.69□□□□□ -0.7
HSPG2-211ENST00000486901 SELLP14151 372 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 STARD6P59095 220 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 LSM6P62312 80 aaKnown RBP10.69□□□□□ -0.7
HSPG2-211ENST00000486901 SHBQ15464 509 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 ZNF385CQ66K41 422 aaPredicted RBP10.69□□□□□ -0.7
HSPG2-211ENST00000486901 TMPRSS7Q7RTY8 843 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 OSR2Q8N2R0 312 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 SGCZQ96LD1 299 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 SYT3Q9BQG1 590 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 POMT1Q9Y6A1 747 aa10.69□□□□□ -0.7
HSPG2-211ENST00000486901 LMO7DNF2Z398 122 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 TRAPPC6AO75865 159 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 CD33P20138 364 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 CD200P41217 278 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 ALDH3B1P43353 468 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 HNRNPKP61978 463 aaKnown RBP eCLIP10.68□□□□□ -0.79e-7■■□□□ 12.7
HSPG2-211ENST00000486901 HOXA4Q00056 320 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-211ENST00000486901 SSC4DQ8WTU2 575 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 MISP3Q96FF7 219 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 C18orf12Q96KH6 178 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 PACRGQ96M98 296 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-211ENST00000486901 RBM7Q9Y580 266 aaKnown RBP10.68□□□□□ -0.7
HSPG2-211ENST00000486901 COL6A6A6NMZ7 2263 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 BTBD17A6NE02 478 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 CASP6P55212 293 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 SRYQ05066 204 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 MALLQ13021 153 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 SSX7Q7RTT5 188 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 NFAM1Q8NET5 270 aaPredicted RBP10.68□□□□□ -0.7
HSPG2-211ENST00000486901 TMEM37Q8WXS4 190 aa10.68□□□□□ -0.7
HSPG2-211ENST00000486901 HLA-CQ95604 372 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms