RNA–Protein interactions for RNA: ENST00000485541.1

SRRM1-214, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 679 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-214ENST00000485541 SUMF2Q8NBJ7 301 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 SCCPDHQ8NBX0 429 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 BHLHE23Q8NDY6 225 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 CASTOR1Q8WTX7 329 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 PPP1R1CQ8WVI7 109 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 PHYHIPLQ96FC7 376 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 ABHD17AQ96GS6 310 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 C2orf50Q96LR7 162 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 HDHD3Q9BSH5 251 aaPredicted RBP6.73□□□□□ -1.33
SRRM1-214ENST00000485541 DPCDQ9BVM2 203 aaPredicted RBP6.73□□□□□ -1.33
SRRM1-214ENST00000485541 MFFQ9GZY8 342 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 FXYD6Q9H0Q3 95 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 OPN3Q9H1Y3 402 aaPredicted RBP6.73□□□□□ -1.33
SRRM1-214ENST00000485541 WDR13Q9H1Z4 485 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 NAA60Q9H7X0 242 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 DNAJB11Q9UBS4 358 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 DUX4Q9UBX2 424 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 FBXO9Q9UK97 447 aaPredicted RBP6.73□□□□□ -1.33
SRRM1-214ENST00000485541 TNFSF18Q9UNG2 199 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 TP53TG5Q9Y2B4 290 aa6.73□□□□□ -1.33
SRRM1-214ENST00000485541 IGLV3-9A0A075B6K5 115 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 IGKV1D-8A0A087WSZ0 117 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 FXYD6-FXYD2A0A087WZ82 144 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 TRAV14DV4A0A0A6YYC5 116 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 TEX13DA0A0J9YY54 714 aaPredicted RBP6.72□□□□□ -1.33
SRRM1-214ENST00000485541 LINC00862A6NCI5 91 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 C5orf51A6NDU8 294 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 A8MXE2 369 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 ERVH48-1M5A8F1 160 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 ARPC5O15511 151 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 TIMM8AO60220 97 aaPredicted RBP6.72□□□□□ -1.33
SRRM1-214ENST00000485541 SIX6O95475 246 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 MPC2O95563 127 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 PPYP01298 95 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 IGHV3-13P01766 116 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 GLI4P10075 376 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 CXCL2P19875 107 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 FCGR2CP31995 323 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 SERPINF1P36955 418 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 NUP62P37198 522 aaPredicted RBP6.72□□□□□ -1.33
SRRM1-214ENST00000485541 HTR2BP41595 481 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 PIGPP57054 158 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 HLA-DRB3P79483 266 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 SORDQ00796 357 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 MSMO1Q15800 293 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 Q6P435 159 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 TRAT1Q6PIZ9 186 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 ZNF474Q6S9Z5 364 aaPredicted RBP6.72□□□□□ -1.33
SRRM1-214ENST00000485541 TMUB2Q71RG4 321 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 LGI3Q8N145 548 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 INO80EQ8NBZ0 244 aaPredicted RBP6.72□□□□□ -1.33
SRRM1-214ENST00000485541 MRPL30Q8TCC3 161 aaKnown RBP6.72□□□□□ -1.33
SRRM1-214ENST00000485541 NEK7Q8TDX7 302 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 SCARB1Q8WTV0 552 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 WDR89Q96FK6 387 aaPredicted RBP6.72□□□□□ -1.33
SRRM1-214ENST00000485541 ABHD14BQ96IU4 210 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 ARL6Q9H0F7 186 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 SLC2A9Q9NRM0 540 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 MBNL3Q9NUK0 354 aaKnown RBP6.72□□□□□ -1.33
SRRM1-214ENST00000485541 MED9Q9NWA0 146 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 CRIM1Q9NZV1 1036 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 KIF25Q9UIL4 384 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 AUP1Q9Y679 476 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 PLCE1Q9P212 2302 aa6.72□□□□□ -1.33
SRRM1-214ENST00000485541 CACNA1DQ01668 2161 aa6.71□□□□□ -1.33
SRRM1-214ENST00000485541 CADP27708 2225 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 TRAV24A0A0B4J272 114 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 KANTRA0A1W2PQU2 76 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 GPR31O00270 319 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 BCL2L11O43521 198 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 LILRA1O75019 489 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 NXPH2O95156 264 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 KNG1P01042 644 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 ZNF44P15621 663 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 GLRA1P23415 457 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 SELENOVP59797 346 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 EIF5AP63241 154 aaKnown RBP6.71□□□□□ -1.34
SRRM1-214ENST00000485541 NKX6-1P78426 367 aaPredicted RBP6.71□□□□□ -1.34
SRRM1-214ENST00000485541 IL15RAQ13261 267 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 EXOSC2Q13868 293 aaKnown RBP6.71□□□□□ -1.34
SRRM1-214ENST00000485541 SMIM21Q3B7S5 101 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 PAN3Q58A45 887 aaKnown RBP6.71□□□□□ -1.34
SRRM1-214ENST00000485541 SPATA46Q5T0L3 261 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 PRSS54Q6PEW0 395 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 ZNF497Q6ZNH5 498 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 WDR86Q86TI4 376 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 LDLRAD3Q86YD5 345 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 CMTM1Q8IZ96 169 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 ZNF565Q8N9K5 539 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 Q8NA96 180 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 NAXEQ8NCW5 288 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 NUP37Q8NFH4 326 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 LRRC20Q8TCA0 184 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 RTN4IP1Q8WWV3 396 aaPredicted RBP6.71□□□□□ -1.34
SRRM1-214ENST00000485541 MAFIPQ8WZ33 124 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 IL22RA2Q969J5 263 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 ERGIC1Q969X5 290 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 KIRREL1Q96J84 757 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 SPIN2AQ99865 258 aa6.71□□□□□ -1.34
SRRM1-214ENST00000485541 SPIN2BQ9BPZ2 258 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms