RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 SLC22A6Q4U2R8 563 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 HSD17B12Q53GQ0 312 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 PAN3Q58A45 887 aaKnown RBP14.65□□□□□ -0.06
HDAC6-225ENST00000483506 KRBOX4Q5JUW0 171 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 GLIPR1L1Q6UWM5 242 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 ZNF782Q6ZMW2 699 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-225ENST00000483506 CEACAM19Q7Z692 300 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 BEND2Q8NDZ0 799 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 OR13D1Q8NGV5 346 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 FOXRED1Q96CU9 486 aaPredicted RBP14.65□□□□□ -0.06
HDAC6-225ENST00000483506 TCF7L1Q9HCS4 588 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 GHRLQ9UBU3 117 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 SESN1Q9Y6P5 492 aa14.65□□□□□ -0.06
HDAC6-225ENST00000483506 A0A1W2PP11 408 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 A0A1W2PRD5 423 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 A0A1W2PRF3 423 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 A0A1W2PRM7 423 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 MEX3AA1L020 520 aaKnown RBP14.64□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A8PA6NJQ4 464 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 GEMIN2O14893 280 aaKnown RBP14.64□□□□□ -0.07
HDAC6-225ENST00000483506 GABRA5P31644 462 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 RPL15P61313 204 aaKnown RBP14.64□□□□□ -0.07
HDAC6-225ENST00000483506 EMX1Q04741 257 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-225ENST00000483506 C1orf100Q5SVJ3 147 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 RSBN1Q5VWQ0 802 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-225ENST00000483506 ZNF626Q68DY1 528 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 AWAT2Q6E213 333 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 HEPN1Q6WQI6 88 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 GCDHQ92947 438 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-225ENST00000483506 TMEM203Q969S6 136 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 DPCDQ9BVM2 203 aaPredicted RBP14.64□□□□□ -0.07
HDAC6-225ENST00000483506 CHIAQ9BZP6 476 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 MEGF9Q9H1U4 602 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 DPAGT1Q9H3H5 408 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 GAL3ST2Q9H3Q3 398 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 OR6C3Q9NZP0 311 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 ZNF581Q9P0T4 197 aa14.64□□□□□ -0.07
HDAC6-225ENST00000483506 RCC2Q9P258 522 aaKnown RBP14.64□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A10PA6NDY2 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A18PA6NE21 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A16PA6NEW6 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A20PA6NIJ5 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A7PA6NKC0 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A22PA8MWA6 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A12PA8MX19 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A5PA8MXJ8 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A23PA8MXZ1 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 OR7C1O76099 320 aaPredicted RBP14.63□□□□□ -0.07
HDAC6-225ENST00000483506 PAHP00439 452 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 IGHV4-59P01825 116 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A15PP0C7V4 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A13PP0C7W8 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A14PP0C7W9 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 FAM90A24PP0C7X0 464 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 CGB3P0DN86 165 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 CGB7P0DN87 165 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 COX7A1P24310 79 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 SSX1Q16384 188 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 AANATQ16613 207 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 GLT8D1Q68CQ7 371 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 TRAPPC6BQ86SZ2 158 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 SVOPQ8N4V2 548 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 SUMF2Q8NBJ7 301 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 C17orf50Q8WW18 174 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 BARHL1Q9BZE3 327 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 LINC00574Q9H8X3 128 aa14.63□□□□□ -0.07
HDAC6-225ENST00000483506 TBL2Q9Y4P3 447 aaKnown RBP14.63□□□□□ -0.07
HDAC6-225ENST00000483506 ZNF729A6NN14 1252 aaPredicted RBP14.62□□□□□ -0.07
HDAC6-225ENST00000483506 HSPB6O14558 160 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 ARL6IP5O75915 188 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 UBBP0CG47 229 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 TAF9Q16594 264 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 UBE2UQ5VVX9 321 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 SPARTQ8N0X7 666 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 PLPPR1Q8TBJ4 325 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 DYRK2Q92630 601 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 TMEM133Q9H2Q1 129 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 SPACA1Q9HBV2 294 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 NDUFB11Q9NX14 153 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 KIF25Q9UIL4 384 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 LRRC42Q9Y546 428 aa14.62□□□□□ -0.07
HDAC6-225ENST00000483506 IGHV2-26A0A0B4J1V2 119 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 FAM181BA6NEQ2 426 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 SLC22A1O15245 554 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 MMP23AO75900 390 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 MGMTP16455 207 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 CD34P28906 385 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 FABP5Q01469 135 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 FOXL1Q12952 345 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 C17orf58Q2M2W7 97 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 SLC35E4Q6ICL7 350 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 OR52W1Q6IF63 320 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 CD200R1LQ6Q8B3 271 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 TMEM104Q8NE00 496 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 OR5R1Q8NH85 324 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 Q96M66 194 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 SLITRK2Q9H156 845 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 VPREB3Q9UKI3 123 aa14.61□□□□□ -0.07
HDAC6-225ENST00000483506 A0A087X0M5 115 aa14.6□□□□□ -0.07
HDAC6-225ENST00000483506 KBTBD11-OT1A0A1B0GTJ5 212 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms