RNA–Protein interactions for RNA: ENST00000481019.5

PTPRF-213, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 459 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-213ENST00000481019 OR14J1Q9UGF5 321 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 ING4Q9UNL4 249 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 POLDIP2Q9Y2S7 368 aa10.08□□□□□ -0.8
PTPRF-213ENST00000481019 TENM1Q9UKZ4 2725 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 NKX6-3A6NJ46 265 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 PAHP00439 452 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 IFNA2P01563 188 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 NDUFB7P17568 137 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 DUSP1P28562 367 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 SNU13P55769 128 aaKnown RBP10.07□□□□□ -0.8
PTPRF-213ENST00000481019 ZP1P60852 638 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 ARF6P62330 175 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 PDZK1IP1Q13113 114 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 IL18Q14116 193 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 P2RY14Q15391 338 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 RSU1Q15404 277 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 SMIM21Q3B7S5 101 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 KRTAP24-1Q3LI83 254 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 CD276Q5ZPR3 534 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 RUSC1-AS1Q66K80 236 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 CNIH2Q6PI25 160 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 Q8IYB0 196 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 Q8N7P7 452 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 TMEM185AQ8NFB2 350 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 H1FXQ92522 213 aaKnown RBP10.07□□□□□ -0.8
PTPRF-213ENST00000481019 FAM46BQ96A09 425 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 SLC25A28Q96A46 364 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 MED30Q96HR3 178 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 ZNF48Q96MX3 618 aaPredicted RBP10.07□□□□□ -0.8
PTPRF-213ENST00000481019 PCGF1Q9BSM1 259 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 DCTN5Q9BTE1 182 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 OCEL1Q9H607 264 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 ESM1Q9NQ30 184 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 C19orf12Q9NSK7 152 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 IL36GQ9NZH8 169 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 EXTL2Q9UBQ6 330 aa10.07□□□□□ -0.8
PTPRF-213ENST00000481019 SLC25A10Q9UBX3 287 aaPredicted RBP10.07□□□□□ -0.8
PTPRF-213ENST00000481019 TRAV40A0A0B4J280 105 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 MDFIC2A0A1B0GVS7 189 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 TMEM82A0PJX8 343 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 XRCC3O43542 346 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 KNG1P01042 644 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 GTF2F2P13984 249 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 ELK1P19419 428 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 MNDAP41218 407 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 CLDN12P56749 244 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 COL10A1Q03692 680 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 LRRC10Q5BKY1 277 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 HACD4Q5VWC8 232 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 ASCL4Q6XD76 172 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 BRD3OSQ6XYD6 125 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 OR4D6Q8NGJ1 314 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 C8orf46Q8TAG6 207 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 MIXL1Q9H2W2 232 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 NUP50Q9UKX7 468 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 STAB1Q9NY15 2570 aa10.06□□□□□ -0.8
PTPRF-213ENST00000481019 CENPVL3A0A0U1RRI6 287 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 TMEM272A0A1B0GTI8 110 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 MEX3AA1L020 520 aaKnown RBP10.05□□□□□ -0.8
PTPRF-213ENST00000481019 LDLRAD4O15165 306 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 CTDSPLO15194 276 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 ZNF737O75373 536 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 TOX4O94842 621 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 ECDO95905 644 aaPredicted RBP10.05□□□□□ -0.8
PTPRF-213ENST00000481019 PPIAL4GP0DN37 164 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 DEFA1P59665 94 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 DEFA3P59666 94 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 ERVFRD-1P60508 538 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 PYDC2Q56P42 97 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 TMEM69Q5SWH9 247 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 FIP1L1Q6UN15 594 aaKnown RBP10.05□□□□□ -0.8
PTPRF-213ENST00000481019 PDZD9Q8IXQ8 264 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 SIGLECL1Q8N7X8 197 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 OR4M1Q8NGD0 313 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 OR56B1Q8NGI3 324 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 OR5H6Q8NGV6 325 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 EMG1Q92979 244 aaKnown RBP10.05□□□□□ -0.8
PTPRF-213ENST00000481019 C1orf147Q96MC9 270 aaPredicted RBP10.05□□□□□ -0.8
PTPRF-213ENST00000481019 TMEM59Q9BXS4 323 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 ATG5Q9H1Y0 275 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 ZNF581Q9P0T4 197 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 ONECUT1Q9UBC0 465 aa10.05□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A10PA6NDY2 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A18PA6NE21 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A16PA6NEW6 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A20PA6NIJ5 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A8PA6NJQ4 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A7PA6NKC0 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A22PA8MWA6 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 TMEM14DPA8MWL7 114 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A12PA8MX19 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A5PA8MXJ8 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A23PA8MXZ1 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 CRTAPO75718 401 aaPredicted RBP10.04□□□□□ -0.8
PTPRF-213ENST00000481019 TK1P04183 234 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 EIF4EP06730 217 aaKnown RBP10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A15PP0C7V4 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A13PP0C7W8 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A14PP0C7W9 464 aa10.04□□□□□ -0.8
PTPRF-213ENST00000481019 FAM90A24PP0C7X0 464 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms