RNA–Protein interactions for RNA: ENST00000480956.1

LSM5-210, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM5, Length 1,736 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-210ENST00000480956 OR13C7P0DN81 318 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 IFI30P13284 250 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 CD1EP15812 388 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 AGTR1P30556 359 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 IL2RGP31785 369 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 SRP9P49458 86 aaKnown RBP6.28□□□□□ -1.4
LSM5-210ENST00000480956 FHL1Q13642 323 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 ACOT6Q3I5F7 207 aaPredicted RBP6.28□□□□□ -1.4
LSM5-210ENST00000480956 ZNF684Q5T5D7 378 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 C1QL2Q7Z5L3 287 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 CALHM3Q86XJ0 350 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 OR13C6PQ8NH95 151 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 C12orf43Q96C57 262 aaKnown RBP6.28□□□□□ -1.4
LSM5-210ENST00000480956 DCPSQ96C86 337 aaKnown RBP6.28□□□□□ -1.4
LSM5-210ENST00000480956 KRTAP3-1Q9BYR8 98 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 ALX4Q9H161 411 aaPredicted RBP6.28□□□□□ -1.4
LSM5-210ENST00000480956 OR52A1Q9UKL2 312 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 ANGPT4Q9Y264 503 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 SLC35A3Q9Y2D2 325 aa6.28□□□□□ -1.4
LSM5-210ENST00000480956 CARHSP1Q9Y2V2 147 aaKnown RBP6.28□□□□□ -1.4
LSM5-210ENST00000480956 MYH15Q9Y2K3 1946 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 RGPD5Q99666 1765 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 MANBAO00462 879 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 NDUFS5O43920 106 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 SNHG28P0DPA3 235 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 CXCR1P25024 350 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 MIPP30301 263 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 GZMMP51124 257 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 TAS2R46P59540 309 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 TCP10Q12799 353 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 SNRNP35Q16560 246 aaKnown RBP6.27□□□□□ -1.41
LSM5-210ENST00000480956 FAM162BQ5T6X4 162 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 RSBN1Q5VWQ0 802 aaPredicted RBP6.27□□□□□ -1.41
LSM5-210ENST00000480956 MUC15Q8N387 334 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 RNASE11Q8TAA1 199 aaKnown RBP6.27□□□□□ -1.41
LSM5-210ENST00000480956 C11orf40Q8WZ69 217 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 ZNF226Q9NYT6 803 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 GSKIPQ9P0R6 139 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 DPM3Q9P2X0 92 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 ALS2Q96Q42 1657 aa6.27□□□□□ -1.41
LSM5-210ENST00000480956 NHSL1Q5SYE7 1610 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 PHRF1Q9P1Y6 1649 aaKnown RBP6.26□□□□□ -1.41
LSM5-210ENST00000480956 DCCP43146 1447 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 PHLPP1O60346 1717 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 IGHV7-81A0A0B4J1V7 117 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 OR4C46A6NHA9 309 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 SOCS2O14508 198 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 STK16O75716 305 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 TOMM40O96008 361 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 CYB5R3P00387 301 aaPredicted RBP6.26□□□□□ -1.41
LSM5-210ENST00000480956 SERPINA7P05543 415 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 ESDP10768 282 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 CXCL3P19876 107 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 OR3A4PP47883 348 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 PSMB2P49721 201 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 GTF2BQ00403 316 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 AQP11Q8NBQ7 271 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 TMBIM1Q969X1 311 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 GALNT14Q96FL9 552 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 FMC1Q96HJ9 113 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 CHST5Q9GZS9 411 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 DEFB127Q9H1M4 99 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 GNB4Q9HAV0 340 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 EDA2RQ9HAV5 297 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 TMEM138Q9NPI0 162 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 ZNF223Q9UK11 482 aaPredicted RBP6.26□□□□□ -1.41
LSM5-210ENST00000480956 RGPD2P0DJD1 1756 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 CAMTA1Q9Y6Y1 1673 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 OVOS2A0A0J9YW53 1432 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 OVOS2Q6IE36 1432 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 SSH2Q76I76 1423 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 ABCA3Q99758 1704 aa6.26□□□□□ -1.41
LSM5-210ENST00000480956 PXDNQ92626 1479 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 TTC3P53804 2025 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 TEX50A0A1B0GTY4 177 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 A0A1B0GXF2 115 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 A0A1W2PQ67 120 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 SLC31A2O15432 143 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 SMIM24O75264 130 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 ARL6IP5O75915 188 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 ZNF708P17019 499 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 LMO2P25791 158 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 ESRRGP62508 458 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 EMX1Q04741 257 aaPredicted RBP6.25□□□□□ -1.41
LSM5-210ENST00000480956 CLEC19AQ6UXS0 136 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 VN1R17PQ8TDU5 208 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 MED1Q15648 1581 aaPredicted RBP6.25□□□□□ -1.41
LSM5-210ENST00000480956 RPL37AP8A6NKH3 93 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 MPTX1A8MV57 137 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 SAP18O00422 153 aaKnown RBP6.25□□□□□ -1.41
LSM5-210ENST00000480956 KPNA4O00629 521 aaPredicted RBP6.25□□□□□ -1.41
LSM5-210ENST00000480956 SPAG7O75391 227 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 CRYGDP07320 174 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 CELA2AP08217 269 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 P2RX1P51575 399 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 C1DQ13901 141 aaKnown RBP6.25□□□□□ -1.41
LSM5-210ENST00000480956 KIAA0087Q14695 138 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 DEFB115Q30KQ5 88 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 FAM78BQ5VT40 261 aa6.25□□□□□ -1.41
LSM5-210ENST00000480956 GRINAQ7Z429 371 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms