RNA–Protein interactions for RNA: ENST00000479660.1

CLDN18-203, Transcript of claudin 18, humanhuman

TSL 2

Gene CLDN18, Length 2,039 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-203ENST00000479660 SPRNQ5BIV9 151 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 IGSF11Q5DX21 431 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 NLRC3Q7RTR2 1065 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 CA5BP1Q8WTZ4 195 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 ZNF486Q96H40 463 aaPredicted RBP12.16□□□□□ -0.46
CLDN18-203ENST00000479660 TREM2Q9NZC2 230 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 DIDO1Q9BTC0 2240 aaKnown RBP12.16□□□□□ -0.46
CLDN18-203ENST00000479660 TRBV6-6A0A0A6YYG2 114 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 KIR2DS1A0A191URI9 304 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 GOSR2O14653 212 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 SLC22A5O76082 557 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 SCTP09683 121 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 CD34P28906 385 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 RBMXP38159 391 aaKnown RBP12.16□□□□□ -0.46
CLDN18-203ENST00000479660 GLP1RP43220 463 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 KIR2DS4P43632 304 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 CEBPDP49716 269 aaPredicted RBP12.16□□□□□ -0.46
CLDN18-203ENST00000479660 KIR2DS1Q14954 304 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 ADIPOQQ15848 244 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 C11orf88Q6PI97 169 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 LINC01560Q8TB33 94 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 ITLN1Q8WWA0 313 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 LRRC46Q96FV0 321 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 HYLS1Q96M11 299 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 TRAF4Q9BUZ4 470 aaPredicted RBP12.16□□□□□ -0.46
CLDN18-203ENST00000479660 RANBP3Q9H6Z4 567 aaPredicted RBP12.16□□□□□ -0.46
CLDN18-203ENST00000479660 DECR2Q9NUI1 292 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 ERRFI1Q9UJM3 462 aaPredicted RBP12.16□□□□□ -0.46
CLDN18-203ENST00000479660 ITPR1Q14643 2758 aa12.16□□□□□ -0.46
CLDN18-203ENST00000479660 FAM172BPA6NC97 362 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 RFPL4AA6NLU0 287 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 TRDCB7Z8K6 153 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 RFPL4AL1F8VTS6 287 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 KNG1P01042 644 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 GRNP28799 593 aaKnown RBP12.15□□□□□ -0.46
CLDN18-203ENST00000479660 DHODHQ02127 395 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 CDSNQ15517 529 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 NCMAPQ5T1S8 102 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 SHEQ5VZ18 495 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 C5orf24Q7Z6I8 188 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 MOGAT3Q86VF5 341 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 OR2T35Q8NGX2 323 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 OR10Z1Q8NGY1 313 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 CASTOR1Q8WTX7 329 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 MITD1Q8WV92 249 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 TMEM230Q96A57 120 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 PLPPR2Q96GM1 343 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 IL19Q9UHD0 177 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 SLC23A1Q9UHI7 598 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 ZDHHC8Q9ULC8 765 aa12.15□□□□□ -0.46
CLDN18-203ENST00000479660 C14orf166Q9Y224 244 aaKnown RBP12.15□□□□□ -0.46
CLDN18-203ENST00000479660 VSTM5A8MXK1 200 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 SRRM5B3KS81 715 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 H7C1Q1 480 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 PSPNO60542 156 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 OR2A4O95047 310 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 SIX6O95475 246 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 IGHV1-46P01743 117 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 GIPP09681 153 aaPredicted RBP12.15□□□□□ -0.47
CLDN18-203ENST00000479660 RCC1P18754 421 aaPredicted RBP12.15□□□□□ -0.47
CLDN18-203ENST00000479660 TNFSF4P23510 183 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 NFYAP23511 347 aaPredicted RBP12.15□□□□□ -0.47
CLDN18-203ENST00000479660 LMO1P25800 156 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 CFHR2P36980 270 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 H2BFSP57053 126 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 FXYD4P59646 89 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 TNFAIP6P98066 277 aaPredicted RBP12.15□□□□□ -0.47
CLDN18-203ENST00000479660 ATXN7L3Q14CW9 347 aaPredicted RBP12.15□□□□□ -0.47
CLDN18-203ENST00000479660 ZNF880Q6PDB4 577 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 PLPPR1Q8TBJ4 325 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 TOMM40LQ969M1 308 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 OR2A7Q96R45 310 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 PHB2Q99623 299 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 KCNJ16Q9NPI9 418 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 RASL12Q9NYN1 266 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 PIPOXQ9P0Z9 390 aa12.15□□□□□ -0.47
CLDN18-203ENST00000479660 ROS1P08922 2347 aa12.14□□□□□ -0.47
CLDN18-203ENST00000479660 BET1O15155 118 aa12.14□□□□□ -0.47
CLDN18-203ENST00000479660 DUS4LO95620 317 aaKnown RBP12.14□□□□□ -0.47
CLDN18-203ENST00000479660 TK1P04183 234 aa12.14□□□□□ -0.47
CLDN18-203ENST00000479660 GATA4P43694 442 aa12.14□□□□□ -0.47
CLDN18-203ENST00000479660 SEC61A1P61619 476 aaKnown RBP12.14□□□□□ -0.47
CLDN18-203ENST00000479660 ZNF497Q6ZNH5 498 aa12.14□□□□□ -0.47
CLDN18-203ENST00000479660 OR5T2Q8NGG2 359 aa12.14□□□□□ -0.47
CLDN18-203ENST00000479660 ZFAND1Q8TCF1 268 aa12.14□□□□□ -0.47
CLDN18-203ENST00000479660 DHRS9Q9BPW9 319 aa12.14□□□□□ -0.47
CLDN18-203ENST00000479660 SHISA9B4DS77 424 aa12.13□□□□□ -0.47
CLDN18-203ENST00000479660 IFNL4K9M1U5 179 aa12.13□□□□□ -0.47
CLDN18-203ENST00000479660 CTSDP07339 412 aaPredicted RBP12.13□□□□□ -0.47
CLDN18-203ENST00000479660 CTXN2P0C2S0 81 aa12.13□□□□□ -0.47
CLDN18-203ENST00000479660 ZNF728P0DKX0 622 aa12.13□□□□□ -0.47
CLDN18-203ENST00000479660 EGR1P18146 543 aa12.13□□□□□ -0.47
CLDN18-203ENST00000479660 DNASE1P24855 282 aa12.13□□□□□ -0.47
CLDN18-203ENST00000479660 LIN54Q6MZP7 749 aa12.13□□□□□ -0.47
CLDN18-203ENST00000479660 GCSAMQ8N6F7 178 aa12.13□□□□□ -0.47
CLDN18-203ENST00000479660 BOLLQ8N9W6 283 aaKnown RBP12.13□□□□□ -0.47
CLDN18-203ENST00000479660 PRR7Q8TB68 274 aa12.13□□□□□ -0.47
CLDN18-203ENST00000479660 CLEC4MQ9H2X3 399 aaPredicted RBP12.13□□□□□ -0.47
CLDN18-203ENST00000479660 DNAJB11Q9UBS4 358 aa12.13□□□□□ -0.47
CLDN18-203ENST00000479660 TRAPPC2LQ9UL33 140 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms