RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 OR5C1Q8NGR4 320 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 FRZBQ92765 325 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 SMOC1Q9H4F8 434 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 ASPMQ8IZT6 3477 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 M0R135 149 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 RPS18P62269 152 aaKnown RBP11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 ANKRD39Q53RE8 183 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 SP5Q6BEB4 398 aaPredicted RBP11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 C17orf78Q8N4C9 275 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 OR14L1PQ8NHC6 308 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 ZNF799Q96GE5 643 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 C19orf25Q9UFG5 118 aaPredicted RBP11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 PILRBQ9UKJ0 227 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 WSB1Q9Y6I7 421 aa11.49□□□□□ -0.57
PDZRN3-208ENST00000479530 TRGC1P0CF51 173 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 MDKP21741 143 aaPredicted RBP11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 LSM6P62312 80 aaKnown RBP11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 RTL6Q6ICC9 239 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 GPR179Q6PRD1 2367 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 GFOD1Q9NXC2 390 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 KIAA1456Q9P272 454 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 FOXD3Q9UJU5 478 aaPredicted RBP11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 ZNF587BE7ETH6 402 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 PPP1R2P9O14990 202 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 LIFP15018 202 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 MSR1P21757 451 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 OR2T2Q6IF00 324 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 YRDCQ86U90 279 aaKnown RBP11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 TMEM252Q8N6L7 170 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 GJC3Q8NFK1 279 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 METTL9Q9H1A3 318 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 PLEK2Q9NYT0 353 aa11.48□□□□□ -0.57
PDZRN3-208ENST00000479530 LOC400499M0QZD8 3231 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 A0A087WWC5 75 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 TP53I11O14683 189 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 DYNLT3P51808 116 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 ALKBH2Q6NS38 261 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 TMEM123Q8N131 208 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 MOB3AQ96BX8 217 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 ANGPTL4Q9BY76 406 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 CALHM2Q9HA72 323 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 PRRC2CQ9Y520 2896 aaKnown RBP11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 RPL36A-HNRNPH2H7BZ11 118 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 FGF5P12034 268 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 DTYMKP23919 212 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 NKX2-1P43699 371 aaPredicted RBP11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 GLIPR1P48060 266 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 NKX6-1P78426 367 aaPredicted RBP11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 ZNF266Q14584 549 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 CLDND2Q8NHS1 167 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 NAT6Q93015 286 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 TVP23CQ96ET8 276 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 NIPSNAP3BQ9BS92 247 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 SMDT1Q9H4I9 107 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 TMED3Q9Y3Q3 217 aa11.47□□□□□ -0.57
PDZRN3-208ENST00000479530 AHCTF1Q8WYP5 2266 aa11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 LOC102723996A0A087X1L8 192 aa11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 C3orf85A0A1B0GTC6 90 aa11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 NPIPA2E9PIF3 369 aa11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 NPIPA3F8WFD2 350 aa11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 TERTO14746 1132 aaKnown RBP11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 DHHO43323 396 aa11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 RFPL3SP0C7P2 107 aa11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 OTX1P32242 354 aaPredicted RBP11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 PMS2CLQ68D20 193 aa11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 TMEM54Q969K7 222 aa11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 SSX3Q99909 188 aa11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 ZNF407Q9C0G0 2248 aa11.46□□□□□ -0.57
PDZRN3-208ENST00000479530 LOC102725191A0A1B0GVB3 256 aa11.46□□□□□ -0.58
PDZRN3-208ENST00000479530 OR5H1A6NKK0 313 aa11.46□□□□□ -0.58
PDZRN3-208ENST00000479530 MPPED1O15442 326 aa11.46□□□□□ -0.58
PDZRN3-208ENST00000479530 PITX3O75364 302 aa11.46□□□□□ -0.58
PDZRN3-208ENST00000479530 NDUFB7P17568 137 aa11.46□□□□□ -0.58
PDZRN3-208ENST00000479530 RBP2P50120 134 aa11.46□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF154Q13106 437 aa11.46□□□□□ -0.58
PDZRN3-208ENST00000479530 SSX9Q7RTT3 188 aa11.46□□□□□ -0.58
PDZRN3-208ENST00000479530 FGFBP3Q8TAT2 258 aa11.46□□□□□ -0.58
PDZRN3-208ENST00000479530 P4HTMQ9NXG6 502 aa11.46□□□□□ -0.58
PDZRN3-208ENST00000479530 ADAM20O43506 726 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 TNFSF12O43508 249 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 TLX3O43711 291 aaPredicted RBP11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 GNRHRP30968 328 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 HOXA6P31267 233 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 RPL23AP62750 156 aaKnown RBP11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 SYT3Q9BQG1 590 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 UNKLQ9H9P5 680 aaKnown RBP11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 BCO1Q9HAY6 547 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 LYRM2Q9NU23 88 aaPredicted RBP11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 DKKL1Q9UK85 242 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 ST3GAL6Q9Y274 331 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 TRDCB7Z8K6 153 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 PPYP01298 95 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 PGA5P0DJD9 388 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 FUT3P21217 361 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 DDTP30046 118 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 GUCA1AP43080 201 aaPredicted RBP11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 EIF3IQ13347 325 aaKnown RBP11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 DAZAP2Q15038 168 aaPredicted RBP11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF506Q5JVG8 444 aa11.45□□□□□ -0.58
PDZRN3-208ENST00000479530 ZNF774Q6NX45 483 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms