RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 NAAAQ02083 359 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 MRPL30Q8TCC3 161 aaKnown RBP18.49■□□□□ 0.55
CCM2-206ENST00000474617 TOMM40LQ969M1 308 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 CYYR1Q96J86 154 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 CABLES2Q9BTV7 478 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 SEBOXQ9HB31 216 aaPredicted RBP18.49■□□□□ 0.55
CCM2-206ENST00000474617 ZNF44P15621 663 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 AADACP22760 399 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 MPV17P39210 176 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 ERVS71-1P61550 626 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 HLA-DRB3P79483 266 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 PDCD1Q15116 288 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 TBR1Q16650 682 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 RGS7BPQ6MZT1 257 aaPredicted RBP18.49■□□□□ 0.55
CCM2-206ENST00000474617 WDR86Q86TI4 376 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 LGI3Q8N145 548 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 ZNF565Q8N9K5 539 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 LILRB1Q8NHL6 650 aaPredicted RBP18.49■□□□□ 0.55
CCM2-206ENST00000474617 LIME1Q9H400 295 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 MED9Q9NWA0 146 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 ELOVL5Q9NYP7 299 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 RDH8Q9NYR8 311 aa18.49■□□□□ 0.55
CCM2-206ENST00000474617 GTF3C1Q12789 2109 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 DUXBA0A1W2PPF3 345 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 ERVH48-1M5A8F1 160 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 ZNHIT1O43257 154 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 RHBDL1O75783 438 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 CRYAAP02489 173 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 IL15RAQ13261 267 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 PAN3Q58A45 887 aaKnown RBP18.48■□□□□ 0.55
CCM2-206ENST00000474617 ZNF474Q6S9Z5 364 aaPredicted RBP18.48■□□□□ 0.55
CCM2-206ENST00000474617 LIAT1Q6ZQX7 453 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 MRGPRGQ86SM5 289 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 OR5T2Q8NGG2 359 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 PRR7Q8TB68 274 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 MBD2Q9UBB5 411 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 TUBD1Q9UJT1 453 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 TP53TG5Q9Y2B4 290 aa18.48■□□□□ 0.55
CCM2-206ENST00000474617 RPS10-NUDT3A0A1W2PQS6 291 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 GLI4P10075 376 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 LMO1P25800 156 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 TDGF1P3P51864 188 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 FXYD4P59646 89 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 TMEM187Q14656 261 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 Q6ZPA2 131 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 FAM90A1Q86YD7 464 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 CMTM1Q8IZ96 169 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 KIRREL1Q96J84 757 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 HS3ST6Q96QI5 342 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 TMEM165Q9HC07 324 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 IL36RNQ9UBH0 155 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 TMED3Q9Y3Q3 217 aa18.47■□□□□ 0.55
CCM2-206ENST00000474617 INTS1Q8N201 2190 aaKnown RBP18.47■□□□□ 0.55
CCM2-206ENST00000474617 ANKRD34BA5PLL1 514 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 C1QTNF9BB2RNN3 333 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 K7EM74 188 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 IFNL4K9M1U5 179 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 GPR31O00270 319 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 CDIPTO14735 213 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 RLN2P04090 185 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 WNT2P09544 360 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 ZNF250P15622 560 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 GLRXP35754 106 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 NHLH1Q02575 133 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 SMCO1Q147U7 214 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 LRRC37A5PQ49AS3 106 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 ZNF497Q6ZNH5 498 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 MARVELD3Q96A59 401 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 ZNF488Q96MN9 340 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 C1QTNF6Q9BXI9 259 aa18.46■□□□□ 0.55
CCM2-206ENST00000474617 RNF222A6NCQ9 220 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 A8MXE2 369 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 SLC33A1O00400 549 aaPredicted RBP18.45■□□□□ 0.54
CCM2-206ENST00000474617 ADAP1O75689 374 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 PTBP3O95758 552 aaKnown RBP18.45■□□□□ 0.54
CCM2-206ENST00000474617 OR2H2O95918 312 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 CFDP00746 253 aaPredicted RBP18.45■□□□□ 0.54
CCM2-206ENST00000474617 CD200P41217 278 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 TMPRSS3P57727 454 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 RBPJQ06330 500 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 IGSF11Q5DX21 431 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 LDLRAD3Q86YD5 345 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 OR10Z1Q8NGY1 313 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 OR10J5Q8NHC4 309 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 S100PBPQ96BU1 408 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 AQP10Q96PS8 301 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 ARPC5LQ9BPX5 153 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 SLC25A32Q9H2D1 315 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 TINAGQ9UJW2 476 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 WIPI2Q9Y4P8 454 aa18.45■□□□□ 0.54
CCM2-206ENST00000474617 HS3ST1O14792 307 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 MPPED1O15442 326 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 MLNRO43193 412 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 GFRA3O60609 400 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 IGHV3-13P01766 116 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 EIF5AP63241 154 aaKnown RBP18.44■□□□□ 0.54
CCM2-206ENST00000474617 IAH1Q2TAA2 248 aaPredicted RBP18.44■□□□□ 0.54
CCM2-206ENST00000474617 SMIM21Q3B7S5 101 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 BATF2Q8N1L9 274 aa18.44■□□□□ 0.54
CCM2-206ENST00000474617 DCUN1D4Q92564 292 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms