RNA–Protein interactions for RNA: ENST00000473533.6

HERC4-209, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best)

Gene HERC4, Length 3,593 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-209ENST00000473533 TGIF2LYQ8IUE0 185 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 ZNF383Q8NA42 475 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 Q8NFD4 153 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 OR2V1Q8NHB1 315 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 RCC1LQ96I51 464 aaKnown RBP5.3□□□□□ -1.56
HERC4-209ENST00000473533 HDHD3Q9BSH5 251 aaPredicted RBP5.3□□□□□ -1.56
HERC4-209ENST00000473533 VAX2Q9UIW0 290 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 LIPGQ9Y5X9 500 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 RNF212BA8MTL3 300 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 SHISA8B8ZZ34 492 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 GPR37O15354 613 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 MBP02144 154 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 CD63P08962 238 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 BCL2P10415 239 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 DYNLT3P51808 116 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 RAC3P60763 192 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 MOB1BQ7L9L4 216 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 OR10D4PQ8NGN7 298 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 AKR7LQ8NHP1 331 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 Q8WTZ3 238 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 MBD3L1Q8WWY6 194 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 LSM10Q969L4 123 aaKnown RBP5.3□□□□□ -1.56
HERC4-209ENST00000473533 HIST1H2AAQ96QV6 131 aa5.3□□□□□ -1.56
HERC4-209ENST00000473533 WDR77Q9BQA1 342 aaPredicted RBP5.3□□□□□ -1.56
HERC4-209ENST00000473533 CCDC85CA6NKD9 419 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 ADAM20O43506 726 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 SPRY1O43609 319 aaPredicted RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 CBR3O75828 277 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 OR7C1O76099 320 aaPredicted RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 LY86O95711 162 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 IGHEP01854 428 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 SERPINE2P07093 398 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 FHITP49789 147 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 CEBPGP53567 150 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 RRADP55042 308 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 ZNF787Q6DD87 383 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 SHISA6Q6ZSJ9 500 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST3H2BBQ8N257 126 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 CYB561D1Q8N8Q1 229 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 EXTL1Q92935 676 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 RAB24Q969Q5 203 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 ACY3Q96HD9 319 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 TP53RKQ96S44 253 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 PRDM14Q9GZV8 571 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 TMEM38BQ9NVV0 291 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 NAT8Q9UHE5 227 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 ZDHHC8Q9ULC8 765 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 TIMM9Q9Y5J7 89 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 hCG_38984A0A1B0GV85 526 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 ARGFXA6NJG6 315 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 FAM90A26D6RGX4 464 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 ANGPTL7O43827 346 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST1H2BKO60814 126 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 C1QL1O75973 258 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 YIF1AO95070 293 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST1H2BJP06899 126 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 LIFP15018 202 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST1H2BOP23527 126 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST1H2BBP33778 126 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 NPBWR2P48146 333 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 SSR4P51571 173 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST1H2BDP58876 126 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST1H2BCP62807 126 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HNF4GQ14541 408 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST2H2BEQ16778 126 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 ACOT6Q3I5F7 207 aaPredicted RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 KRTAP27-1Q3LI81 207 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 Q3ZCU0 254 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 NMSQ5H8A3 153 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 DBX2Q6ZNG2 339 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 PPP1R3BQ86XI6 285 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 OR10A7Q8NGE5 316 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 RNASEH2CQ8TDP1 164 aaKnown RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST1H2BHQ93079 126 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST1H2BNQ99877 126 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 HIST1H2BMQ99879 126 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 RARRES2Q99969 163 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 AGMATQ9BSE5 352 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 CABLES2Q9BTV7 478 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 BCL2L14Q9BZR8 327 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 SRD5A3Q9H8P0 318 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 Q9N2K0 584 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 TDRD6O60522 2096 aaKnown RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 TRBV6-6A0A0A6YYG2 114 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 C9J4A7 227 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 DEGS1O15121 323 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 GCGP01275 180 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 APLNRP35414 380 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 MDH2P40926 338 aaKnown RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 FGF12P61328 243 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 RAB11AP62491 216 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 ATP6V1FQ16864 119 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 PYY3Q5JQD4 70 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 ZNF574Q6ZN55 896 aaPredicted RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 C16orf47Q6ZP98 133 aaPredicted RBP5.29□□□□□ -1.56
HERC4-209ENST00000473533 AAED1Q7RTV5 226 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 NEK7Q8TDX7 302 aa5.29□□□□□ -1.56
HERC4-209ENST00000473533 EDARADDQ8WWZ3 215 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms