RNA–Protein interactions for RNA: ENST00000472928.5

HDAC1-205, Transcript of histone deacetylase 1, humanhuman

TSL 2

Gene HDAC1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-205ENST00000472928 OR8G5Q8NG78 346 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 KCNG3Q8TAE7 436 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 ZFAND1Q8TCF1 268 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 GTF3AQ92664 365 aaKnown RBP5.36□□□□□ -1.55
HDAC1-205ENST00000472928 GCDHQ92947 438 aaPredicted RBP5.36□□□□□ -1.55
HDAC1-205ENST00000472928 SLAMF9Q96A28 289 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 PHF21AQ96BD5 680 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 S100A16Q96FQ6 103 aaKnown RBP5.36□□□□□ -1.55
HDAC1-205ENST00000472928 SOSTQ9BQB4 213 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 NICN1Q9BSH3 213 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 CST11Q9H112 138 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 METTL9Q9H1A3 318 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 BANF2Q9H503 90 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 AUNIPQ9H7T9 357 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 TUBG2Q9NRH3 451 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 RAB22AQ9UL26 194 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 PLA2G2DQ9UNK4 145 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 ING4Q9UNL4 249 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 MRPS7Q9Y2R9 242 aaKnown RBP5.36□□□□□ -1.55
HDAC1-205ENST00000472928 NOP16Q9Y3C1 178 aaKnown RBP5.36□□□□□ -1.55
HDAC1-205ENST00000472928 AUP1Q9Y679 476 aa5.36□□□□□ -1.55
HDAC1-205ENST00000472928 A0A0A6YYD4 124 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 IGKV1-12A0A0C4DH73 117 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 IGHV3-64DA0A0J9YX35 117 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 LRP5LA4QPB2 252 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 METTL21EPA6NDL7 271 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 H0YL77 283 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 MLNRO43193 412 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 XRCC3O43542 346 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 ZNF780AO75290 641 aaPredicted RBP5.35□□□□□ -1.55
HDAC1-205ENST00000472928 SCGNO76038 276 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 CYB5AP00167 134 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 IGKV1D-12P01611 117 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 CSTBP04080 98 aaKnown RBP5.35□□□□□ -1.55
HDAC1-205ENST00000472928 ZNF250P15622 560 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 MGMTP16455 207 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 GLRXP35754 106 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 MNDAP41218 407 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 HTR2BP41595 481 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 ALDH3B1P43353 468 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 HAAOP46952 286 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 INPP1P49441 399 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 S100A12P80511 92 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 PITPNAQ00169 270 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 PDZK1IP1Q13113 114 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 MST1LQ2TV78 715 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 MOGAT2Q3SYC2 334 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 HIST2H2BDQ6DRA6 164 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 HAGHLQ6PII5 290 aaPredicted RBP5.35□□□□□ -1.55
HDAC1-205ENST00000472928 Q6ZR03 302 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 WDR86Q86TI4 376 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 LRP11Q86VZ4 500 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 CALHM1Q8IU99 346 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 TCTE3Q8IZS6 198 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 LINC00469Q8N7U9 141 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 OR5A2Q8NGI9 324 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 FAM216AQ8WUB2 273 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 SMIM4Q8WVI0 70 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 MRPL24Q96A35 216 aaKnown RBP5.35□□□□□ -1.55
HDAC1-205ENST00000472928 PTX4Q96A99 478 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 MRPL37Q9BZE1 423 aaKnown RBP5.35□□□□□ -1.55
HDAC1-205ENST00000472928 SELENOIQ9C0D9 397 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 BPESC1Q9GZL8 116 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 SLC22A4Q9H015 551 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 LPAR5Q9H1C0 372 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 NARFLQ9H6Q4 476 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 SCPEP1Q9HB40 452 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 MSL2Q9HCI7 577 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 CA10Q9NS85 328 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 TMEM100Q9NV29 134 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 NKIRAS2Q9NYR9 191 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 IL36GQ9NZH8 169 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 TAAR3PQ9P1P4 343 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 GHRLQ9UBU3 117 aa5.35□□□□□ -1.55
HDAC1-205ENST00000472928 IGLV3-9A0A075B6K5 115 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 TRAV18A0A075B6X5 111 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 A0A0A6YYH2 397 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 LINC00854A0A1B0GVQ3 168 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 PLSCR5A0PG75 271 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 TMEM235A6NFC5 223 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 A6NJ64 397 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 A6NLC8 198 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 TMEM210A6NLX4 147 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 LEUTXA8MZ59 168 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 F5H5P2 479 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 TRAPPC2LH3BP13 241 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 CTDSPLO15194 276 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 GSTZ1O43708 216 aaPredicted RBP5.34□□□□□ -1.55
HDAC1-205ENST00000472928 SYNGR1O43759 233 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 IGHV3-13P01766 116 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 SFTPBP07988 381 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 OR4A8P0C604 315 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 PTHLHP12272 177 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 BCL3P20749 454 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 CPT2P23786 658 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 GABRR1P24046 479 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 HLA-DMAP28067 261 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 VEGFCP49767 419 aa5.34□□□□□ -1.55
HDAC1-205ENST00000472928 SNU13P55769 128 aaKnown RBP5.34□□□□□ -1.55
HDAC1-205ENST00000472928 RBM11P57052 281 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms