RNA–Protein interactions for RNA: ENST00000471309.1

VPS52-216, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-216ENST00000471309 SEC22CQ9BRL7 303 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 TMUB1Q9BVT8 246 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 BEX2Q9BXY8 128 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 WDR13Q9H1Z4 485 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 MED28Q9H204 178 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 BEX1Q9HBH7 125 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 VSIG4Q9Y279 399 aa7.9□□□□□ -1.14
VPS52-216ENST00000471309 PRR14LQ5THK1 2151 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 B9A039 149 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 SDCBPO00560 298 aaPredicted RBP7.89□□□□□ -1.15
VPS52-216ENST00000471309 FABP7O15540 132 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 SSNA1O43805 119 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 HPXP02790 462 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 OR4E1P0C645 316 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 SULT1A3P0DMM9 295 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 SULT1A4P0DMN0 295 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 OR5H8P0DN80 308 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 GLP1RP43220 463 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 CEBPDP49716 269 aaPredicted RBP7.89□□□□□ -1.15
VPS52-216ENST00000471309 TAS2R31P59538 309 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 UBE2MP61081 183 aaKnown RBP7.89□□□□□ -1.15
VPS52-216ENST00000471309 PAX5Q02548 391 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 ZNF672Q499Z4 452 aaPredicted RBP7.89□□□□□ -1.15
VPS52-216ENST00000471309 ZNF660Q6AZW8 331 aaPredicted RBP7.89□□□□□ -1.15
VPS52-216ENST00000471309 ZNF497Q6ZNH5 498 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 TMED4Q7Z7H5 227 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 SLC25A42Q86VD7 318 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 PLPPR1Q8TBJ4 325 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 MARCH1Q8TCQ1 289 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 FAM222BQ8WU58 562 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 SCGB3A2Q96PL1 93 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 DHRS9Q9BPW9 319 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 MS4A5Q9H3V2 200 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 HEATR1Q9H583 2144 aaKnown RBP7.89□□□□□ -1.15
VPS52-216ENST00000471309 TMEM165Q9HC07 324 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 GCM1Q9NP62 436 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 DECR2Q9NUI1 292 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 RNF7Q9UBF6 113 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 OR14J1Q9UGF5 321 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 ZNF221Q9UK13 617 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 MGAT4AQ9UM21 535 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 WIPI2Q9Y4P8 454 aa7.89□□□□□ -1.15
VPS52-216ENST00000471309 PRRC2CQ9Y520 2896 aaKnown RBP7.89□□□□□ -1.15
VPS52-216ENST00000471309 IGKV1D-17A0A075B6S4 117 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 LRRC30A6NM36 301 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 TRDCB7Z8K6 153 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 B8ZZF3 427 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 PSPNO60542 156 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 CTXN2P0C2S0 81 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 GSTT2P0CG29 244 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 OR3A1P47881 315 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 NPY4RP50391 375 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 HLA-DRB3P79483 266 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 ATXN7L3Q14CW9 347 aaPredicted RBP7.88□□□□□ -1.15
VPS52-216ENST00000471309 FCN2Q15485 313 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 C4orf46Q504U0 113 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 DHRS11Q6UWP2 260 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 TCTE3Q8IZS6 198 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 LILRB1Q8NHL6 650 aaPredicted RBP7.88□□□□□ -1.15
VPS52-216ENST00000471309 ZNF431Q8TF32 576 aaPredicted RBP7.88□□□□□ -1.15
VPS52-216ENST00000471309 CAPSLQ8WWF8 208 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 NEUROG1Q92886 237 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 PIK3IP1Q96FE7 263 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 ZNF2Q9BSG1 426 aaPredicted RBP7.88□□□□□ -1.15
VPS52-216ENST00000471309 CABLES2Q9BTV7 478 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 EGLN1Q9GZT9 426 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 FXYD6Q9H0Q3 95 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 DYNLRB1Q9NP97 96 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 MBNL3Q9NUK0 354 aaKnown RBP7.88□□□□□ -1.15
VPS52-216ENST00000471309 ING3Q9NXR8 418 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 CISD1Q9NZ45 108 aaKnown RBP7.88□□□□□ -1.15
VPS52-216ENST00000471309 DNAJB11Q9UBS4 358 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 ZNF69Q9UC07 566 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 ZNF222Q9UK12 451 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 GPR132Q9UNW8 380 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 PPP1R3CQ9UQK1 317 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 SPTA1P02549 2419 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 TANC2Q9HCD6 1990 aa7.88□□□□□ -1.15
VPS52-216ENST00000471309 MEIKINA0A087WXM9 373 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 TMEM30CPA0ZSE6 113 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 OR5H14A6NHG9 310 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 RFPL4AA6NLU0 287 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 A8MV72 311 aaPredicted RBP7.87□□□□□ -1.15
VPS52-216ENST00000471309 NPIPB11E5RHQ5 1161 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 RFPL4AL1F8VTS6 287 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 ZNF737O75373 536 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 DIRAS3O95661 229 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 PLAUP00749 431 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 HLA-AP01891 365 aaKnown RBP7.87□□□□□ -1.15
VPS52-216ENST00000471309 PSG2P11465 335 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 IRF2P14316 349 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 PRDX2P32119 198 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 CD80P33681 288 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 SEC61A1P61619 476 aaKnown RBP7.87□□□□□ -1.15
VPS52-216ENST00000471309 SNRPD2P62316 118 aaKnown RBP7.87□□□□□ -1.15
VPS52-216ENST00000471309 CCL8P80075 99 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 HOXA4Q00056 320 aaPredicted RBP7.87□□□□□ -1.15
VPS52-216ENST00000471309 CD83Q01151 205 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 COL10A1Q03692 680 aa7.87□□□□□ -1.15
VPS52-216ENST00000471309 DHRS2Q13268 280 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms