RNA–Protein interactions for RNA: ENST00000471260.1

HMGN1-211, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 615 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-211ENST00000471260 PGA5P0DJD9 388 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 SELLP14151 372 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 ELK1P19419 428 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 RAB3BP20337 219 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 UBE2E1P51965 193 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 RRAS2P62070 204 aaPredicted RBP11.07□□□□□ -0.64
HMGN1-211ENST00000471260 IDNKQ5T6J7 187 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 ACP7Q6ZNF0 438 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 ZNF561Q8N587 486 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 YIPF7Q8N8F6 280 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 ZNRF1Q8ND25 227 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 OR5D13Q8NGL4 314 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 ZFAND1Q8TCF1 268 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 DEDD2Q8WXF8 326 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 TNFRSF14Q92956 283 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 C10orf35Q96D05 121 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 C4orf36Q96KX1 117 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 MMP28Q9H239 520 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 SIRT7Q9NRC8 400 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 TNFRSF19Q9NS68 423 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 C1RLQ9NZP8 487 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 SLC22A13Q9Y226 551 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 ALG5Q9Y673 324 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 TRRAPQ9Y4A5 3859 aa11.07□□□□□ -0.64
HMGN1-211ENST00000471260 PQLC2LA1A4F0 135 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 CLPSL1A2RUU4 121 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 C7orf66A4D0T2 115 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 BTBD17A6NE02 478 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 RFPL4AA6NLU0 287 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 RFPL4AL1F8VTS6 287 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 RNASEK-C17orf49H0YIS7 233 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 NPFFO15130 113 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 MAGEB4O15481 346 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-211ENST00000471260 DHFRP00374 187 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 ARSBP15848 533 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 OMGP23515 440 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 MPZP25189 248 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 SCAND1P57086 179 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 MRPS10P82664 201 aaKnown RBP11.06□□□□□ -0.64
HMGN1-211ENST00000471260 P2RY14Q15391 338 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 YIF1BQ5BJH7 314 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 OLFML2AQ68BL7 652 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 ZNF57Q68EA5 555 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-211ENST00000471260 KCTD20Q7Z5Y7 419 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 CEACAM19Q7Z692 300 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 CATSPERDQ86XM0 798 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 PDZD9Q8IXQ8 264 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 TMEM185AQ8NFB2 350 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 TRMT10AQ8TBZ6 339 aaKnown RBP11.06□□□□□ -0.64
HMGN1-211ENST00000471260 C15orf40Q8WUR7 153 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 PKIBQ9C010 78 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 HES4Q9HCC6 221 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 DIABLOQ9NR28 239 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 ZNRD1Q9P1U0 126 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 SLC7A11Q9UPY5 501 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 NUBP2Q9Y5Y2 271 aa11.06□□□□□ -0.64
HMGN1-211ENST00000471260 INMT-MINDY4F8WBC2 141 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 GPR137BO60478 399 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 RPP14O95059 124 aaKnown RBP11.05□□□□□ -0.64
HMGN1-211ENST00000471260 NXPH2O95156 264 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 IGHV4-59P01825 116 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 MAPK3P27361 379 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-211ENST00000471260 PRDX2P32119 198 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 NKX2-5P52952 324 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-211ENST00000471260 RELBQ01201 579 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 IL24Q13007 206 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 DYRK1AQ13627 763 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 ACSM3Q53FZ2 586 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 PLA1AQ53H76 456 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 DMRTC1Q5HYR2 192 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 UBE2NLQ5JXB2 153 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 C17orf107Q6ZR85 190 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 ZNF767PQ75MW2 155 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 SSX6Q7RTT6 188 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 SAMD12Q8N8I0 201 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 OR4M1Q8NGD0 313 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 OR5R1Q8NH85 324 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 TBX5Q99593 518 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 NRIP2Q9BQI9 281 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 FAM234AQ9H0X4 552 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 PLEKHA1Q9HB21 404 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 GPR173Q9NS66 373 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 SPATA2Q9UM82 520 aa11.05□□□□□ -0.64
HMGN1-211ENST00000471260 SIRT4Q9Y6E7 314 aaPredicted RBP11.05□□□□□ -0.64
HMGN1-211ENST00000471260 hCG_1809904A0A1W2PP81 198 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 A0A1W2PPE2 198 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 A0A1W2PR64 198 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 A0A1W2PRV1 198 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 J3QLW9 94 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 SYT7O43581 403 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 SYNGR1O43759 233 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 PAHP00439 452 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 EIF4EP06730 217 aaKnown RBP11.04□□□□□ -0.64
HMGN1-211ENST00000471260 UBCP0CG48 685 aaKnown RBP11.04□□□□□ -0.64
HMGN1-211ENST00000471260 ZNF19P17023 458 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 MNDAP41218 407 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 CAPZA1P52907 286 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 ERVK11-1P61568 191 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 MIDNQ504T8 468 aa11.04□□□□□ -0.64
HMGN1-211ENST00000471260 UNQ9370/PRO34162Q6UXP9 181 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms