RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 MRPS24Q96EL2 167 aaKnown RBP7.46□□□□□ -1.22
SF3A1-206ENST00000471037 CEP19Q96LK0 163 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 ELL3Q9HB65 397 aaPredicted RBP7.46□□□□□ -1.22
SF3A1-206ENST00000471037 RNF7Q9UBF6 113 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 RAB22AQ9UL26 194 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 DOCK11Q5JSL3 2073 aa7.46□□□□□ -1.22
SF3A1-206ENST00000471037 IGKV1-12A0A0C4DH73 117 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 hCG_1807616A0A1W2PRN6 198 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 CTDSP2O14595 271 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 CDIPTO14735 213 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 SYNGR1O43759 233 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 ANGPTL7O43827 346 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 HPGDSO60760 199 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 SCGNO76038 276 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 HTR3BO95264 441 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 IGKV1D-12P01611 117 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 IGHV4-59P01825 116 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 PGA5P0DJD9 388 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 GTF2F2P13984 249 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 MGMTP16455 207 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 SERPINA2P20848 420 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 UNC119Q13432 240 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 ELP2Q6IA86 826 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 WDR82Q6UXN9 313 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 C11orf53Q8IXP5 236 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 OR6Q1Q8NGQ2 317 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 OR5H6Q8NGV6 325 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 SLAMF9Q96A28 289 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 URM1Q9BTM9 101 aaKnown RBP7.45□□□□□ -1.22
SF3A1-206ENST00000471037 TMEM59Q9BXS4 323 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 ABCG5Q9H222 651 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 C16orf95Q9H693 158 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 UFSP2Q9NUQ7 469 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 C1orf123Q9NWV4 160 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 RHBDL2Q9NX52 303 aa7.45□□□□□ -1.22
SF3A1-206ENST00000471037 A0A0A6YYH2 397 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 TRAV38-1A0A0B4J264 116 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 A0A0U1RQK1 487 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 METTL21EPA6NDL7 271 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 OOEPA6NGQ2 149 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 A6NJ64 397 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 AKR7A2O43488 359 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 ADAM20O43506 726 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 CRTAPO75718 401 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-206ENST00000471037 RHBDL1O75783 438 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 NXPH2O95156 264 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 TSPAN15O95858 294 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 MPIG6BO95866 241 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 ECDO95905 644 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-206ENST00000471037 BCL3P20749 454 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 TALDO1P37837 337 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 ERVK11-1P61568 191 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 RPS27AP62979 156 aaKnown RBP7.44□□□□□ -1.22
SF3A1-206ENST00000471037 HOXA4Q00056 320 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-206ENST00000471037 C2orf68Q2NKX9 166 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 NHLRC3Q5JS37 347 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 SFRP4Q6FHJ7 346 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-206ENST00000471037 OR10K2Q6IF99 312 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 RAB12Q6IQ22 244 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 BAIAP2L2Q6UXY1 529 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 Q6ZSV7 163 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 ZNF826PQ6ZT77 177 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 LINC00596Q86U02 117 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 LAX1Q8IWV1 398 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 OSR2Q8N2R0 312 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 TMEM104Q8NE00 496 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 OR10K1Q8NGX5 313 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 S100ZQ8WXG8 99 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 EMG1Q92979 244 aaKnown RBP7.44□□□□□ -1.22
SF3A1-206ENST00000471037 LHX4Q969G2 390 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 FAM46BQ96A09 425 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 PHF21AQ96BD5 680 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 SLC25A38Q96DW6 304 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 S100A16Q96FQ6 103 aaKnown RBP7.44□□□□□ -1.22
SF3A1-206ENST00000471037 DMRTB1Q96MA1 342 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 NRIP2Q9BQI9 281 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 TM2D1Q9BX74 207 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 MIXL1Q9H2W2 232 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 DPAGT1Q9H3H5 408 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 HES4Q9HCC6 221 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 RASL12Q9NYN1 266 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 MTCH1Q9NZJ7 389 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 RABL2AQ9UBK7 228 aaPredicted RBP7.44□□□□□ -1.22
SF3A1-206ENST00000471037 KAAG1Q9UBP8 84 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 RABL2BQ9UNT1 228 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 KPTNQ9Y664 436 aa7.44□□□□□ -1.22
SF3A1-206ENST00000471037 A0A1W2PP11 408 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A10PA6NDY2 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A18PA6NE21 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A16PA6NEW6 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A20PA6NIJ5 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A8PA6NJQ4 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A7PA6NKC0 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A22PA8MWA6 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A12PA8MX19 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A5PA8MXJ8 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM90A23PA8MXZ1 464 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM25AB3EWG3 89 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM25CB3EWG5 89 aa7.43□□□□□ -1.22
SF3A1-206ENST00000471037 FAM25GB3EWG6 89 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms