RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 BRS3P32247 399 aa13.84□□□□□ -0.19
BRAT1-204ENST00000469750 CDC34P49427 236 aaPredicted RBP13.84□□□□□ -0.19
BRAT1-204ENST00000469750 UCNP55089 124 aa13.84□□□□□ -0.19
BRAT1-204ENST00000469750 IL24Q13007 206 aa13.84□□□□□ -0.19
BRAT1-204ENST00000469750 IRF3Q14653 427 aa13.84□□□□□ -0.19
BRAT1-204ENST00000469750 TNXAQ16473 311 aa13.84□□□□□ -0.19
BRAT1-204ENST00000469750 GPA33Q99795 319 aa13.84□□□□□ -0.19
BRAT1-204ENST00000469750 RAB33BQ9H082 229 aa13.84□□□□□ -0.19
BRAT1-204ENST00000469750 SOX15O60248 233 aa13.83□□□□□ -0.19
BRAT1-204ENST00000469750 PTP4A3O75365 173 aa13.83□□□□□ -0.19
BRAT1-204ENST00000469750 ADAP1O75689 374 aa13.83□□□□□ -0.19
BRAT1-204ENST00000469750 STPG1Q5TH74 334 aa13.83□□□□□ -0.19
BRAT1-204ENST00000469750 PET117Q6UWS5 81 aa13.83□□□□□ -0.19
BRAT1-204ENST00000469750 OR1A1Q9P1Q5 309 aa13.83□□□□□ -0.19
BRAT1-204ENST00000469750 QSER1Q2KHR3 1735 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 RPS4XP62701 263 aaKnown RBP13.83□□□□□ -0.2
BRAT1-204ENST00000469750 OR1L4Q8NGR5 311 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 ZNF665Q9H7R5 613 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 ARL2-SNX15V9GYD0 113 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 DOCK5Q9H7D0 1870 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 TRAV8-7A0A075B6U6 113 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 LEUTXA8MZ59 168 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 K7ESF4 209 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 POLR2GP62487 172 aaKnown RBP eCLIP13.83□□□□□ -0.2
BRAT1-204ENST00000469750 C19orf57Q0VDD7 668 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 ZP4Q12836 540 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 CLEC18BQ6UXF7 455 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 TREM2Q9NZC2 230 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 ZNF107Q9UII5 783 aaPredicted RBP13.83□□□□□ -0.2
BRAT1-204ENST00000469750 A0A1W2PRD5 423 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 A0A1W2PRF3 423 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 A0A1W2PRM7 423 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 TMEM210A6NLX4 147 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 FOXL2P58012 376 aa13.83□□□□□ -0.2
BRAT1-204ENST00000469750 TPRP12270 2363 aaKnown RBP13.83□□□□□ -0.2
BRAT1-204ENST00000469750 A0A0J9YW62 118 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 HMSDA8MTL9 139 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 FCER1GP30273 86 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 FAM157AC9JC47 383 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 SYNGR2O43760 224 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 CA11O75493 328 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 MDP1Q86V88 176 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 PHYHIPLQ96FC7 376 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 MIOXQ9UGB7 285 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 V9GYH0 126 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 CABIN1Q9Y6J0 2220 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 PPYP01298 95 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 FCARP24071 287 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 TSPO2Q5TGU0 170 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 OR10G4Q8NGN3 311 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 OR10G9Q8NGN4 311 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 OR10G7Q8NGN6 311 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 ZNF638Q14966 1978 aaKnown RBP13.82□□□□□ -0.2
BRAT1-204ENST00000469750 SEC16AO15027 2179 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 ABLIM2Q6H8Q1 611 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 ASCL5Q7RTU5 278 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 MYPOPQ86VE0 399 aaPredicted RBP13.82□□□□□ -0.2
BRAT1-204ENST00000469750 SH2D2AQ9NP31 389 aa13.82□□□□□ -0.2
BRAT1-204ENST00000469750 MRPS18AQ9NVS2 196 aaKnown RBP13.82□□□□□ -0.2
BRAT1-204ENST00000469750 AP4M1O00189 453 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 ZNF25P17030 456 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-204ENST00000469750 VDAC1P21796 283 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 RTP5Q14D33 572 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 LILRB1Q8NHL6 650 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-204ENST00000469750 UBTD1Q9HAC8 227 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 GOLT1BQ9Y3E0 138 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 VSIG8P0DPA2 414 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 USF1P22415 310 aaPredicted RBP13.81□□□□□ -0.2
BRAT1-204ENST00000469750 RPL29P47914 159 aaKnown RBP13.81□□□□□ -0.2
BRAT1-204ENST00000469750 TMEM33P57088 247 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 STARD6P59095 220 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 GAPTQ8N292 157 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 SLC25A22Q9H936 323 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 PCM1Q15154 2024 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 IGHV1-45A0A0A0MS14 117 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 TMEM183BQ1AE95 376 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 TOMM20LQ6UXN7 152 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 MIXL1Q9H2W2 232 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 HSBP1O75506 76 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 DXOO77932 396 aaKnown RBP13.81□□□□□ -0.2
BRAT1-204ENST00000469750 ZNF205O95201 554 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 SFTPCP11686 197 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 HLA-DRB3P79483 266 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 TMEM241Q24JQ0 296 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 SLC25A45Q8N413 288 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 ZNF441Q8N8Z8 693 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 OR52L2PQ8NGH6 319 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 SLC2A9Q9NRM0 540 aa13.81□□□□□ -0.2
BRAT1-204ENST00000469750 YTHDF2Q9Y5A9 579 aaKnown RBP13.81□□□□□ -0.2
BRAT1-204ENST00000469750 ZNF737O75373 536 aa13.8□□□□□ -0.2
BRAT1-204ENST00000469750 ASAH2BP0C7U1 165 aa13.8□□□□□ -0.2
BRAT1-204ENST00000469750 FTH1P19P0C7X4 201 aa13.8□□□□□ -0.2
BRAT1-204ENST00000469750 KRTDAPP60985 99 aa13.8□□□□□ -0.2
BRAT1-204ENST00000469750 GGTLC2Q14390 218 aa13.8□□□□□ -0.2
BRAT1-204ENST00000469750 ZNF260Q3ZCT1 412 aa13.8□□□□□ -0.2
BRAT1-204ENST00000469750 SSX8Q7RTT4 187 aa13.8□□□□□ -0.2
BRAT1-204ENST00000469750 LINC00596Q86U02 117 aa13.8□□□□□ -0.2
BRAT1-204ENST00000469750 FGF11Q92914 225 aa13.8□□□□□ -0.2
BRAT1-204ENST00000469750 PRSS27Q9BQR3 290 aa13.8□□□□□ -0.2
BRAT1-204ENST00000469750 HEXA-AS1Q9H8Q6 139 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms