RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 EXTL2Q9UBQ6 330 aa9.24□□□□□ -0.93
VCP-204ENST00000466100 SLC25A10Q9UBX3 287 aaPredicted RBP9.24□□□□□ -0.93
VCP-204ENST00000466100 RNF223E7ERA6 249 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 HSPB6O14558 160 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 MGST3O14880 152 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 HLA-DQB1P01920 261 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 MELTFP08582 738 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 GSTP1P09211 210 aaKnown RBP9.23□□□□□ -0.93
VCP-204ENST00000466100 GNB3P16520 340 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 ETV6P41212 452 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 NPY4RP50391 375 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 ATXN7L3Q14CW9 347 aaPredicted RBP9.23□□□□□ -0.93
VCP-204ENST00000466100 GRK1Q15835 563 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 NKAPLQ5M9Q1 402 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 TMEM69Q5SWH9 247 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 ZNF497Q6ZNH5 498 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 LINC00299Q6ZSB3 139 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 Q6ZTK2 550 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 NLRC3Q7RTR2 1065 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 TCF23Q7RTU1 214 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 BPIFB2Q8N4F0 458 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 DTX3Q8N9I9 347 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 DACT3Q96B18 629 aaPredicted RBP9.23□□□□□ -0.93
VCP-204ENST00000466100 RAB39BQ96DA2 213 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 NEDD4LQ96PU5 975 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 FAAP24Q9BTP7 215 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 REG4Q9BYZ8 158 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 AUNIPQ9H7T9 357 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 DIABLOQ9NR28 239 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 ADAM30Q9UKF2 790 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 ELF5Q9UKW6 265 aaPredicted RBP9.23□□□□□ -0.93
VCP-204ENST00000466100 PCDHB10Q9UN67 800 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 V9GYH0 126 aa9.23□□□□□ -0.93
VCP-204ENST00000466100 NSD1Q96L73 2696 aaPredicted RBP9.22□□□□□ -0.93
VCP-204ENST00000466100 TRAV18A0A075B6X5 111 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 UBE2QL1A1L167 161 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 TMEM235A6NFC5 223 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 SERPINE3A8MV23 424 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 FAM25AB3EWG3 89 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 FAM25CB3EWG5 89 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 FAM25GB3EWG6 89 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 C22orf46C9J442 243 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 FAM157AC9JC47 383 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 MCRIP1C9JLW8 97 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 NDUFB3O43676 98 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 CA11O75493 328 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 TPPPO94811 219 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 NAPSAO96009 420 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 PTHLHP12272 177 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 ZFP36P26651 326 aaKnown RBP9.22□□□□□ -0.93
VCP-204ENST00000466100 ERP29P30040 261 aaKnown RBP9.22□□□□□ -0.93
VCP-204ENST00000466100 P2RX3P56373 397 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 PAX2Q02962 417 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 RBM39Q14498 530 aaKnown RBP9.22□□□□□ -0.93
VCP-204ENST00000466100 CDNFQ49AH0 187 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 LRRC10Q5BKY1 277 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 HACD4Q5VWC8 232 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 SLC35E4Q6ICL7 350 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 OR5D13Q8NGL4 314 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 C8orf46Q8TAG6 207 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 PPP1R35Q8TAP8 253 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 MRPL30Q8TCC3 161 aaKnown RBP9.22□□□□□ -0.93
VCP-204ENST00000466100 DIRAS2Q96HU8 199 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 SSBP3Q9BWW4 388 aaPredicted RBP9.22□□□□□ -0.93
VCP-204ENST00000466100 NCOR1P1Q9H4R4 102 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 ZMAT3Q9HA38 289 aaKnown RBP9.22□□□□□ -0.93
VCP-204ENST00000466100 PLEKHJ1Q9NW61 149 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 CLN8Q9UBY8 286 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 AK3Q9UIJ7 227 aa9.22□□□□□ -0.93
VCP-204ENST00000466100 POLR3KQ9Y2Y1 108 aaPredicted RBP9.22□□□□□ -0.93
VCP-204ENST00000466100 TRBV6-6A0A0A6YYG2 114 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 A0A0G2JMP0 313 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 A0A0X1KG70 313 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 GPR37O15354 613 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 PHF1O43189 567 aaPredicted RBP9.21□□□□□ -0.94
VCP-204ENST00000466100 SSX5O60225 188 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 MT-ND4P03905 459 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 S100A5P33763 92 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 GLIPR1P48060 266 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 GNB2P62879 340 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 AESQ08117 197 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 MADCAM1Q13477 382 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 EDDM3AQ14507 147 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 ARL6IP1Q15041 203 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 ZNF79Q15937 498 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 PNLIPRP3Q17RR3 467 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 C11orf91Q3C1V1 193 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 ESCO2Q56NI9 601 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 ZNF880Q6PDB4 577 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 BAIAP2L2Q6UXY1 529 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 MFSD4AQ8N468 514 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 TPRX1Q8N7U7 411 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 LY6G5BQ8NDX9 201 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 OR4M2Q8NGB6 313 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 NUDCD2Q8WVJ2 157 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 GCDHQ92947 438 aaPredicted RBP9.21□□□□□ -0.94
VCP-204ENST00000466100 PHF21AQ96BD5 680 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 ABHD1Q96SE0 405 aa9.21□□□□□ -0.94
VCP-204ENST00000466100 HDHD3Q9BSH5 251 aaPredicted RBP9.21□□□□□ -0.94
VCP-204ENST00000466100 DCTN5Q9BTE1 182 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms