RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 SLC7A10Q9NS82 523 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 AK3Q9UIJ7 227 aa8.47□□□□□ -1.05
PTPRD-207ENST00000463477 SPG11Q96JI7 2443 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 IGKV1D-8A0A087WSZ0 117 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 IGKV1-12A0A0C4DH73 117 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 C13orf42A0A1B0GVH6 325 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 ZSCAN5BA6NJL1 495 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 NUDT19A8MXV4 375 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 F5H0A9 414 aaPredicted RBP8.46□□□□□ -1.05
PTPRD-207ENST00000463477 H0YIZ8 118 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 SPRY1O43609 319 aaPredicted RBP8.46□□□□□ -1.05
PTPRD-207ENST00000463477 ANGPTL7O43827 346 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 PDCD6O75340 191 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 CST4P01036 141 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 IGKV1D-12P01611 117 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 PATE4P0C8F1 98 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 TPT1P13693 172 aaKnown RBP8.46□□□□□ -1.05
PTPRD-207ENST00000463477 PGAM2P15259 253 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 ARR3P36575 388 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 RBM11P57052 281 aaKnown RBP8.46□□□□□ -1.05
PTPRD-207ENST00000463477 ARF1P84077 181 aaKnown RBP8.46□□□□□ -1.05
PTPRD-207ENST00000463477 FAM27E3Q08E93 113 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 DAZAP2Q15038 168 aaPredicted RBP8.46□□□□□ -1.05
PTPRD-207ENST00000463477 TAF9Q16594 264 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 DMRTC1Q5HYR2 192 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 PLCXD3Q63HM9 321 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 UQCC3Q6UW78 93 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 BEND4Q6ZU67 534 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 TMEM200AQ86VY9 491 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 SGPP2Q8IWX5 399 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 CCDC36Q8IYA8 594 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 LRTM2Q8N967 370 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 CPEB3Q8NE35 698 aaKnown RBP8.46□□□□□ -1.05
PTPRD-207ENST00000463477 OR10AD1Q8NGE0 317 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 FAM222BQ8WU58 562 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 DCUN1D4Q92564 292 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 LINC00052Q96N35 136 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 SULT4A1Q9BR01 284 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 ZNF2Q9BSG1 426 aaPredicted RBP8.46□□□□□ -1.05
PTPRD-207ENST00000463477 TMEM100Q9NV29 134 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 ABCA4P78363 2273 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 TEX15Q9BXT5 2789 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 TACC2O95359 2948 aa8.46□□□□□ -1.05
PTPRD-207ENST00000463477 PQLC2LA1A4F0 135 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 FAM221AA4D161 298 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 RAB19A4D1S5 217 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 POM121CA8CG34 1229 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 TAAR5O14804 337 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 BET1O15155 118 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 ADAP1O75689 374 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 OR5H8P0DN80 308 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 FUT3P21217 361 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 RBMXP38159 391 aaKnown RBP8.46□□□□□ -1.06
PTPRD-207ENST00000463477 EIF5AP63241 154 aaKnown RBP8.46□□□□□ -1.06
PTPRD-207ENST00000463477 NKAPLQ5M9Q1 402 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 NUFIP2Q7Z417 695 aaKnown RBP8.46□□□□□ -1.06
PTPRD-207ENST00000463477 OR51F2Q8NH61 342 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 LINC01560Q8TB33 94 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 MAFIPQ8WZ33 124 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 APOBEC3DQ96AK3 386 aaPredicted RBP8.46□□□□□ -1.06
PTPRD-207ENST00000463477 CYYR1Q96J86 154 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 ZNF75AQ96N20 296 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 FAAP24Q9BTP7 215 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 SUCNR1Q9BXA5 334 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 METTL8Q9H825 291 aaKnown RBP8.46□□□□□ -1.06
PTPRD-207ENST00000463477 ZNF286AQ9HBT8 521 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 CRIM1Q9NZV1 1036 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 NDRG3Q9UGV2 375 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 ST3GAL6Q9Y274 331 aa8.46□□□□□ -1.06
PTPRD-207ENST00000463477 FBN2P35556 2912 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 CSMD1Q96PZ7 3565 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 C16orf97H3BN30 126 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 GEMIN2O14893 280 aaKnown RBP8.45□□□□□ -1.06
PTPRD-207ENST00000463477 PI3P19957 117 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 TLE4Q04727 773 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 MALLQ13021 153 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 RBM39Q14498 530 aaKnown RBP8.45□□□□□ -1.06
PTPRD-207ENST00000463477 ATXN7L3Q14CW9 347 aaPredicted RBP8.45□□□□□ -1.06
PTPRD-207ENST00000463477 TUSC1Q2TAM9 212 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 BAP18Q8IXM2 172 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 FBXL14Q8N1E6 418 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 PIGCQ92535 297 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 APH1AQ96BI3 265 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 RRNAD1Q96FB5 475 aaKnown RBP8.45□□□□□ -1.06
PTPRD-207ENST00000463477 OR10C1Q96KK4 312 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 HDHD3Q9BSH5 251 aaPredicted RBP8.45□□□□□ -1.06
PTPRD-207ENST00000463477 C12orf4Q9NQ89 552 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 CYTL1Q9NRR1 136 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 GPR160Q9UJ42 338 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 KCNIP3Q9Y2W7 256 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 CREBBPQ92793 2442 aa8.45□□□□□ -1.06
PTPRD-207ENST00000463477 TEX46H3BTG2 121 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 J3QW42 95 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 GOSR1O95249 250 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 SFTPBP07988 381 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 ZNF728P0DKX0 622 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 MPV17LQ2QL34 196 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 TFAP2EQ6VUC0 442 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 LINC00596Q86U02 117 aa8.44□□□□□ -1.06
PTPRD-207ENST00000463477 ZNF611Q8N823 705 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms