RNA–Protein interactions for RNA: ENST00000462548.6

RPRD1B-203, Transcript of regulation of nuclear pre-mRNA domain containing 1B, humanhuman

TSL 5

Gene RPRD1B, Length 2,436 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1B-203ENST00000462548 DCAF16Q9NXF7 216 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 CISD1Q9NZ45 108 aaKnown RBP12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 EHFQ9NZC4 300 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 ZNF221Q9UK13 617 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 EDARQ9UNE0 448 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 VSIG4Q9Y279 399 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 HMX3A6NHT5 357 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 RFPL4AA6NLU0 287 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 RFPL4AL1F8VTS6 287 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 H3BUI4 141 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 M0R233 179 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 SH2D1BO14796 132 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 PSPNO60542 156 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 C1QL1O75973 258 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 LHBP01229 141 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 IFNA6P05013 189 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 ADH4P08319 380 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 APOBEC3AP31941 199 aaPredicted RBP12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 OR3A3P47888 321 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 CCL8P80075 99 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 ATPAF1Q5TC12 328 aaPredicted RBP12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 PXDC1Q5TGL8 231 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 C17orf107Q6ZR85 190 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 PPA2Q9H2U2 334 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 LIME1Q9H400 295 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 NARFLQ9H6Q4 476 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 CHMP1AQ9HD42 196 aaPredicted RBP12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 Q9N2K0 584 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 ING3Q9NXR8 418 aa12.61□□□□□ -0.39
RPRD1B-203ENST00000462548 IGHV3OR15-7A0A075B7D8 119 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 A8MV72 311 aaPredicted RBP12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 KNG1P01042 644 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 RLN1P04808 185 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 GLAP06280 429 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 ARFGEF3Q5TH69 2177 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 ZNF843Q8N446 348 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 CD177Q8N6Q3 437 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 TRIM77I1YAP6 450 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 CD55P08174 381 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 SMIM21Q3B7S5 101 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 LHFPL1Q86WI0 220 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 ARRDC1Q8N5I2 433 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 OR52B4Q8NGK2 314 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 SLC25A21Q9BQT8 299 aaPredicted RBP12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 OR51J1Q9H342 316 aa12.6□□□□□ -0.39
RPRD1B-203ENST00000462548 TRAV39A0A0B4J263 110 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 TMEM82A0PJX8 343 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 VSTM5A8MXK1 200 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 CYB5R3P00387 301 aaPredicted RBP12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 TNFSF4P23510 183 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 LMO1P25800 156 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 CD80P33681 288 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 RBM39Q14498 530 aaKnown RBP12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 ATXN7L3Q14CW9 347 aaPredicted RBP12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 ZMYND11Q15326 602 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 EFNB3Q15768 340 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 ZNF672Q499Z4 452 aaPredicted RBP12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 AADACL3Q5VUY0 350 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 GLDNQ6ZMI3 551 aaPredicted RBP12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 MARCH1Q8TCQ1 289 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 ZNF286AQ9HBT8 521 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 DYSFO75923 2080 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 IGKV1D-17A0A075B6S4 117 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 PSG2P11465 335 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 NPY4RP50391 375 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 RRAS2P62070 204 aaPredicted RBP12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 TSPAN5P62079 268 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 ZNF660Q6AZW8 331 aaPredicted RBP12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 FIP1L1Q6UN15 594 aaKnown RBP12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 OR6F1Q8NGZ6 308 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 TERB2Q8NHR7 220 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 RASL12Q9NYN1 266 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 RALYQ9UKM9 306 aaKnown RBP12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 WIPI2Q9Y4P8 454 aa12.59□□□□□ -0.39
RPRD1B-203ENST00000462548 OR5H14A6NHG9 310 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 SCTP09683 121 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 RCC1P18754 421 aaPredicted RBP12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 COL10A1Q03692 680 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 SWI5Q1ZZU3 235 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 IGSF11Q5DX21 431 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 SHEQ5VZ18 495 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 ZNF880Q6PDB4 577 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 Q6ZS49 121 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 TMED4Q7Z7H5 227 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 Q8TCH9 128 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 DACT3Q96B18 629 aaPredicted RBP12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 TMPRSS13Q9BYE2 586 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 RNF7Q9UBF6 113 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 HRNRQ86YZ3 2850 aaPredicted RBP12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 TRBV6-6A0A0A6YYG2 114 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 IL5P05113 134 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 RNF224P0DH78 156 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 OR5H8P0DN80 308 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 TAGLNQ01995 201 aaKnown RBP12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 FCN2Q15485 313 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 ZNF497Q6ZNH5 498 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 CCDC107Q8WV48 283 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 ST6GAL2Q96JF0 529 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 DIRC2Q96SL1 478 aa12.58□□□□□ -0.4
RPRD1B-203ENST00000462548 PPP1R3CQ9UQK1 317 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms