RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 HPNP05981 417 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 CSRP1P21291 193 aaKnown RBP13.38□□□□□ -0.27
LMNB1-203ENST00000460265 ZNF92Q03936 586 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 RAB35Q15286 201 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 CLEC18BQ6UXF7 455 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 ADPRHL1Q8NDY3 354 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 FGFBP3Q8TAT2 258 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 RNF126Q9BV68 326 aa13.38□□□□□ -0.27
LMNB1-203ENST00000460265 M0R296 226 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 ZNF735P0CB33 412 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 HOXA6P31267 233 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 SRSF4Q08170 494 aaKnown RBP13.37□□□□□ -0.27
LMNB1-203ENST00000460265 HES3Q5TGS1 186 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 SLC22A25Q6T423 547 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 CNEP1R1Q8N9A8 125 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 IL1F10Q8WWZ1 152 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 HAS2Q92819 552 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 APH1AQ96BI3 265 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 MEMO1Q9Y316 297 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 FRYQ5TBA9 3013 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 CUL9Q8IWT3 2517 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 WIPF3A6NGB9 483 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 SOD3P08294 240 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 ZNF17P17021 662 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 MIDNQ504T8 468 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 C4orf17Q53FE4 359 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 GCNT2Q8N0V5 402 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 PTX4Q96A99 478 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 GPR35Q9HC97 309 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 PNRC2Q9NPJ4 139 aaKnown RBP13.37□□□□□ -0.27
LMNB1-203ENST00000460265 PKDREJQ9NTG1 2253 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 LDLRAD4O15165 306 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 NXPH3O95157 252 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 NTF4P34130 210 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 GPM6AP51674 278 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 RAB1AP62820 205 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 H3F3AP84243 136 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 PNLIPRP3Q17RR3 467 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 BTNL8Q6UX41 500 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 DNM1P46Q6ZS02 220 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 OR56B2PQ8NGI1 322 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 UBALD1Q8TB05 177 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 POMT1Q9Y6A1 747 aa13.37□□□□□ -0.27
LMNB1-203ENST00000460265 SPTAN1Q13813 2472 aaKnown RBP13.37□□□□□ -0.27
LMNB1-203ENST00000460265 ZNF727A8MUV8 499 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 H0YIZ8 118 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 FCGR2CP31995 323 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 DCAF10Q5QP82 559 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 HEPN1Q6WQI6 88 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.36□□□□□ -0.27
LMNB1-203ENST00000460265 OR10AD1Q8NGE0 317 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 PACRGQ96M98 296 aaPredicted RBP13.36□□□□□ -0.27
LMNB1-203ENST00000460265 OR5AC2Q9NZP5 309 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 ZNF581Q9P0T4 197 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 HEATR1Q9H583 2144 aaKnown RBP13.36□□□□□ -0.27
LMNB1-203ENST00000460265 HS3ST1O14792 307 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 DUS4LO95620 317 aaKnown RBP13.36□□□□□ -0.27
LMNB1-203ENST00000460265 ZNF16P17020 682 aaPredicted RBP13.36□□□□□ -0.27
LMNB1-203ENST00000460265 RPP30P78346 268 aaKnown RBP13.36□□□□□ -0.27
LMNB1-203ENST00000460265 GGNBP1Q5YKI7 109 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 C1QL4Q86Z23 238 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 ZDHHC22Q8N966 263 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 SUMF1Q8NBK3 374 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 FAM173AQ9BQD7 235 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 CNTNAP3Q9BZ76 1288 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 DIRAS3O95661 229 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 FOXG1P55316 489 aaPredicted RBP13.36□□□□□ -0.27
LMNB1-203ENST00000460265 ANKRD39Q53RE8 183 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 SOHLH1Q5JUK2 328 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 TMEM123Q8N131 208 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 RDH5Q92781 318 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 OR2H1Q9GZK4 316 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 OPN3Q9H1Y3 402 aaPredicted RBP13.36□□□□□ -0.27
LMNB1-203ENST00000460265 GOLT1BQ9Y3E0 138 aa13.36□□□□□ -0.27
LMNB1-203ENST00000460265 B4E171 279 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 C9orf172C9J069 976 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 HSPA12AO43301 675 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 TSPAN7P41732 249 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 RPS23P62266 143 aaKnown RBP13.35□□□□□ -0.27
LMNB1-203ENST00000460265 ARL6IP1Q15041 203 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 OR2M7Q8NG81 312 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 RAB24Q969Q5 203 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 BSCL2Q96G97 398 aaPredicted RBP13.35□□□□□ -0.27
LMNB1-203ENST00000460265 PARP11Q9NR21 331 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 APC2O95996 2303 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 MARCH11A6NNE9 402 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 DHRS7CA6NNS2 312 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 CYB5BO43169 146 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 MELTFP08582 738 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 CAMLGP49069 296 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 SULT1A2P50226 295 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 PIGPP57054 158 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 RAB32Q13637 225 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 SLC10A1Q14973 349 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 OR13G1Q8NGZ3 307 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 C5orf66Q9H5L9 145 aa13.35□□□□□ -0.27
LMNB1-203ENST00000460265 OR6C6A6NF89 314 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 ZNF728P0DKX0 622 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 FGF7P21781 194 aa13.34□□□□□ -0.27
LMNB1-203ENST00000460265 CD81P60033 236 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms