RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 POMT1Q9Y6A1 747 aa8.8□□□□□ -1
UBR4-208ENST00000459947 MINOS1-NBL1R4GNA1 71 aa8.8□□□□□ -1
UBR4-208ENST00000459947 A0A1B0GW55 424 aa8.8□□□□□ -1
UBR4-208ENST00000459947 CLDN34H7C241 214 aa8.8□□□□□ -1
UBR4-208ENST00000459947 AIPO00170 330 aa8.8□□□□□ -1
UBR4-208ENST00000459947 ORC5O43913 435 aa8.8□□□□□ -1
UBR4-208ENST00000459947 FBP1P09467 338 aa8.8□□□□□ -1
UBR4-208ENST00000459947 DUX4L2P0CJ85 424 aa8.8□□□□□ -1
UBR4-208ENST00000459947 DUX4L3P0CJ86 424 aa8.8□□□□□ -1
UBR4-208ENST00000459947 DUX4L4P0CJ87 422 aa8.8□□□□□ -1
UBR4-208ENST00000459947 DUX4L5P0CJ88 424 aa8.8□□□□□ -1
UBR4-208ENST00000459947 DUX4L6P0CJ89 424 aa8.8□□□□□ -1
UBR4-208ENST00000459947 DUX4L7P0CJ90 424 aa8.8□□□□□ -1
UBR4-208ENST00000459947 GADD45AP24522 165 aa8.8□□□□□ -1
UBR4-208ENST00000459947 LGALS4P56470 323 aa8.8□□□□□ -1
UBR4-208ENST00000459947 DUX4L9Q6RFH8 374 aaPredicted RBP8.8□□□□□ -1
UBR4-208ENST00000459947 SUMF2Q8NBJ7 301 aa8.8□□□□□ -1
UBR4-208ENST00000459947 OR10K1Q8NGX5 313 aa8.8□□□□□ -1
UBR4-208ENST00000459947 PPA2Q9H2U2 334 aa8.8□□□□□ -1
UBR4-208ENST00000459947 DUX4Q9UBX2 424 aa8.8□□□□□ -1
UBR4-208ENST00000459947 FAM96BQ9Y3D0 163 aa8.8□□□□□ -1
UBR4-208ENST00000459947 CALCBP10092 127 aa8.79□□□□□ -1
UBR4-208ENST00000459947 HILS1P60008 231 aa8.79□□□□□ -1
UBR4-208ENST00000459947 DYNC1I2Q13409 638 aaKnown RBP8.79□□□□□ -1
UBR4-208ENST00000459947 TUSC1Q2TAM9 212 aa8.79□□□□□ -1
UBR4-208ENST00000459947 ZNF596Q8TC21 504 aa8.79□□□□□ -1
UBR4-208ENST00000459947 TNFRSF14Q92956 283 aa8.79□□□□□ -1
UBR4-208ENST00000459947 DPAGT1Q9H3H5 408 aa8.79□□□□□ -1
UBR4-208ENST00000459947 OCEL1Q9H607 264 aa8.79□□□□□ -1
UBR4-208ENST00000459947 HSF4Q9ULV5 492 aa8.79□□□□□ -1
UBR4-208ENST00000459947 ETV7Q9Y603 341 aa8.79□□□□□ -1
UBR4-208ENST00000459947 HIVEP1P15822 2718 aa8.79□□□□□ -1
UBR4-208ENST00000459947 LRBAP50851 2863 aa8.79□□□□□ -1
UBR4-208ENST00000459947 CD34P28906 385 aa8.79□□□□□ -1
UBR4-208ENST00000459947 HEPN1Q6WQI6 88 aa8.79□□□□□ -1
UBR4-208ENST00000459947 OR52M1Q8NGK5 317 aa8.79□□□□□ -1
UBR4-208ENST00000459947 OR5R1Q8NH85 324 aa8.79□□□□□ -1
UBR4-208ENST00000459947 LHX4Q969G2 390 aa8.79□□□□□ -1
UBR4-208ENST00000459947 FAM46BQ96A09 425 aa8.79□□□□□ -1
UBR4-208ENST00000459947 FAM3DQ96BQ1 224 aa8.79□□□□□ -1
UBR4-208ENST00000459947 ORAI1Q96D31 301 aa8.79□□□□□ -1
UBR4-208ENST00000459947 C1orf147Q96MC9 270 aaPredicted RBP8.79□□□□□ -1
UBR4-208ENST00000459947 BCL7BQ9BQE9 202 aa8.79□□□□□ -1
UBR4-208ENST00000459947 KCNIP1Q9NZI2 227 aa8.79□□□□□ -1
UBR4-208ENST00000459947 AK6Q9Y3D8 172 aaKnown RBP8.79□□□□□ -1
UBR4-208ENST00000459947 ABCA2Q9BZC7 2435 aa8.79□□□□□ -1
UBR4-208ENST00000459947 IFITM5A6NNB3 132 aa8.79□□□□□ -1
UBR4-208ENST00000459947 NPFFO15130 113 aa8.79□□□□□ -1
UBR4-208ENST00000459947 PSPNO60542 156 aa8.79□□□□□ -1
UBR4-208ENST00000459947 AVPP01185 164 aa8.79□□□□□ -1
UBR4-208ENST00000459947 DUSP1P28562 367 aa8.79□□□□□ -1
UBR4-208ENST00000459947 GP2P55259 537 aaKnown RBP8.79□□□□□ -1
UBR4-208ENST00000459947 C22orf42Q6IC83 251 aa8.79□□□□□ -1
UBR4-208ENST00000459947 C1orf229Q6ZS94 237 aaPredicted RBP8.79□□□□□ -1
UBR4-208ENST00000459947 LDLRAD3Q86YD5 345 aa8.79□□□□□ -1
UBR4-208ENST00000459947 LINC00574Q9H8X3 128 aa8.79□□□□□ -1
UBR4-208ENST00000459947 ETAA1Q9NY74 926 aa8.79□□□□□ -1
UBR4-208ENST00000459947 TRAV24A0A0B4J272 114 aa8.78□□□□□ -1
UBR4-208ENST00000459947 OOSP1A8MZH6 123 aa8.78□□□□□ -1
UBR4-208ENST00000459947 PAHP00439 452 aa8.78□□□□□ -1
UBR4-208ENST00000459947 DLX6P56179 175 aa8.78□□□□□ -1
UBR4-208ENST00000459947 HNRNPA0Q13151 305 aaKnown RBP8.78□□□□□ -1
UBR4-208ENST00000459947 PIGYQ3MUY2 71 aa8.78□□□□□ -1
UBR4-208ENST00000459947 KLF17Q5JT82 389 aaPredicted RBP8.78□□□□□ -1
UBR4-208ENST00000459947 FAM27D1Q5T7N8 215 aa8.78□□□□□ -1
UBR4-208ENST00000459947 RAB12Q6IQ22 244 aa8.78□□□□□ -1
UBR4-208ENST00000459947 IL17RELQ6ZVW7 336 aa8.78□□□□□ -1
UBR4-208ENST00000459947 BATF2Q8N1L9 274 aa8.78□□□□□ -1
UBR4-208ENST00000459947 IL36RNQ9UBH0 155 aa8.78□□□□□ -1
UBR4-208ENST00000459947 MEIKINA0A087WXM9 373 aa8.78□□□□□ -1
UBR4-208ENST00000459947 CENPVL3A0A0U1RRI6 287 aa8.78□□□□□ -1
UBR4-208ENST00000459947 GEMIN2O14893 280 aaKnown RBP8.78□□□□□ -1
UBR4-208ENST00000459947 LPLP06858 475 aa8.78□□□□□ -1
UBR4-208ENST00000459947 VSIG8P0DPA2 414 aa8.78□□□□□ -1
UBR4-208ENST00000459947 CEACAM3P40198 252 aa8.78□□□□□ -1
UBR4-208ENST00000459947 PRRX1P54821 245 aa8.78□□□□□ -1
UBR4-208ENST00000459947 RSBN1Q5VWQ0 802 aaPredicted RBP8.78□□□□□ -1
UBR4-208ENST00000459947 CLEC7AQ9BXN2 247 aa8.78□□□□□ -1
UBR4-208ENST00000459947 ZNF69Q9UC07 566 aa8.78□□□□□ -1
UBR4-208ENST00000459947 A0A0A6YYH2 397 aa8.78□□□□□ -1
UBR4-208ENST00000459947 A6NJ64 397 aa8.78□□□□□ -1
UBR4-208ENST00000459947 SPINT2O43291 252 aa8.78□□□□□ -1
UBR4-208ENST00000459947 AIREO43918 545 aa8.78□□□□□ -1
UBR4-208ENST00000459947 FCN3O75636 299 aa8.78□□□□□ -1
UBR4-208ENST00000459947 IL1AP01583 271 aa8.78□□□□□ -1
UBR4-208ENST00000459947 IGHV1-8P0DP01 117 aa8.78□□□□□ -1
UBR4-208ENST00000459947 IL3RAP26951 378 aa8.78□□□□□ -1
UBR4-208ENST00000459947 GLP1RP43220 463 aa8.78□□□□□ -1
UBR4-208ENST00000459947 MRPS15P82914 257 aaKnown RBP8.78□□□□□ -1
UBR4-208ENST00000459947 HOXA4Q00056 320 aaPredicted RBP8.78□□□□□ -1
UBR4-208ENST00000459947 TAF9Q16594 264 aa8.78□□□□□ -1
UBR4-208ENST00000459947 LIAT1Q6ZQX7 453 aa8.78□□□□□ -1
UBR4-208ENST00000459947 OR11H6Q8NGC7 330 aa8.78□□□□□ -1
UBR4-208ENST00000459947 YIPF6Q96EC8 236 aa8.78□□□□□ -1
UBR4-208ENST00000459947 CHST6Q9GZX3 395 aa8.78□□□□□ -1
UBR4-208ENST00000459947 PEX16Q9Y5Y5 336 aa8.78□□□□□ -1
UBR4-208ENST00000459947 ZNF273Q14593 569 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 GAPTQ8N292 157 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 Q8N7P7 452 aa8.77□□□□□ -1.01
UBR4-208ENST00000459947 SSMEM1Q8WWF3 244 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms