RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 CFHR2P36980 270 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 GLP1RP43220 463 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 KIR2DS4P43632 304 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 GATA4P43694 442 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 KCNJ3P48549 501 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 CCR6P51684 374 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 ERVK11-1P61568 191 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 TSPAN5P62079 268 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 TNFAIP6P98066 277 aaPredicted RBP7.56□□□□□ -1.2
VPS50-207ENST00000458530 TFF3Q07654 80 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 KIR2DS1Q14954 304 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 ZNF146Q15072 292 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 GRK1Q15835 563 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 SRSF7Q16629 238 aaKnown RBP eCLIP7.56□□□□□ -1.2
VPS50-207ENST00000458530 SHEQ5VZ18 495 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 SIGIRRQ6IA17 410 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 ADAM5Q6NVV9 412 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 IDO2Q6ZQW0 420 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 WDR86Q86TI4 376 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 ZNF554Q86TJ5 538 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 CADM3Q8N126 398 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 ZDHHC22Q8N966 263 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 OR51S1Q8NGJ8 323 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 PPP1R35Q8TAP8 253 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 SNAPC3Q92966 411 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 FBXW5Q969U6 566 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 MEGF10Q96KG7 1140 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 SULT4A1Q9BR01 284 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 FAAP24Q9BTP7 215 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 ST6GALNAC5Q9BVH7 336 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 PPA2Q9H2U2 334 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 HES4Q9HCC6 221 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 DYNLRB1Q9NP97 96 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 NECAP2Q9NVZ3 263 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 TREM2Q9NZC2 230 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 NPTNQ9Y639 398 aa7.56□□□□□ -1.2
VPS50-207ENST00000458530 VPS13CQ709C8 3753 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 DYSFO75923 2080 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP7.55□□□□□ -1.2
VPS50-207ENST00000458530 UBE2QL1A1L167 161 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 LRRC30A6NM36 301 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 M0QYG6 137 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 ARPC1BO15143 372 aaKnown RBP7.55□□□□□ -1.2
VPS50-207ENST00000458530 SPRY3O43610 288 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 RHBDL1O75783 438 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 GOSR1O95249 250 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 CD55P08174 381 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 APOBEC3AP31941 199 aaPredicted RBP7.55□□□□□ -1.2
VPS50-207ENST00000458530 SERPINF1P36955 418 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 TAS2R31P59538 309 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 MAB21L1Q13394 359 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 CDK10Q15131 360 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 EFNB3Q15768 340 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 ADIPOQQ15848 244 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 SCGB2B2Q4G0G5 96 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 PAN3Q58A45 887 aaKnown RBP7.55□□□□□ -1.2
VPS50-207ENST00000458530 OR52W1Q6IF63 320 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 FAAP20Q6NZ36 180 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 C11orf88Q6PI97 169 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 WDR82Q6UXN9 313 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 MEX3BQ6ZN04 569 aaKnown RBP7.55□□□□□ -1.2
VPS50-207ENST00000458530 ACP7Q6ZNF0 438 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 Q6ZS49 121 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 LRP11Q86VZ4 500 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 C1orf87Q8N0U7 546 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 GVQW1Q8N7I0 195 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 OR4S1Q8NGB4 309 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 OR5AP2Q8NGF4 316 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 LRRC29Q8WV35 223 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 GIMAP1Q8WWP7 306 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 NINJ1Q92982 152 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 MED30Q96HR3 178 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 OR2V2Q96R30 315 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 DPCDQ9BVM2 203 aaPredicted RBP7.55□□□□□ -1.2
VPS50-207ENST00000458530 TINAGL1Q9GZM7 467 aaPredicted RBP7.55□□□□□ -1.2
VPS50-207ENST00000458530 MS4A5Q9H3V2 200 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 GSX1Q9H4S2 264 aaPredicted RBP7.55□□□□□ -1.2
VPS50-207ENST00000458530 SEBOXQ9HB31 216 aaPredicted RBP7.55□□□□□ -1.2
VPS50-207ENST00000458530 C1orf123Q9NWV4 160 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 ETAA1Q9NY74 926 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 EHFQ9NZC4 300 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 DNAJB11Q9UBS4 358 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 ELF5Q9UKW6 265 aaPredicted RBP7.55□□□□□ -1.2
VPS50-207ENST00000458530 ALG5Q9Y673 324 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 NBEAL1Q6ZS30 2694 aa7.55□□□□□ -1.2
VPS50-207ENST00000458530 TRBV6-6A0A0A6YYG2 114 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 TMEM82A0PJX8 343 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 C7orf66A4D0T2 115 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 HMX3A6NHT5 357 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 C17orf100A8MU93 164 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 SNRPGP15A8MWD9 76 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 SRRM5B3KS81 715 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 SHISA9B4DS77 424 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 B9A039 149 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 CREBL2O60519 120 aaPredicted RBP7.54□□□□□ -1.2
VPS50-207ENST00000458530 HAND1O96004 215 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 IGHV1-46P01743 117 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 PMP2P02689 132 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 RLN1P04808 185 aa7.54□□□□□ -1.2
VPS50-207ENST00000458530 IL5P05113 134 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms