RNA–Protein interactions for RNA: ENST00000456315.6

DEPDC1-202, Transcript of DEP domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene DEPDC1, Length 5,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-202ENST00000456315 ZNF92Q03936 586 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 SGCGQ13326 291 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF542PQ5EBM4 170 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 ATOH7Q8N100 152 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF283Q8N7M2 679 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 OR4D5Q8NGN0 318 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 OR5C1Q8NGR4 320 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 OR1L1Q8NH94 360 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 CERS4Q9HA82 394 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 SLC2A9Q9NRM0 540 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 TRAV34A0A0B4J273 112 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 TSTD3H0UI37 97 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 KAT7O95251 611 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 SCGB1D2O95969 90 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 C1QTNF9P0C862 333 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 SCAND1P57086 179 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 RPS16P62249 146 aaKnown RBP3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 TRA2BP62995 288 aaKnown RBP3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 TMEM187Q14656 261 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 GCSAMLQ5JQS6 135 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 DDIT4LQ96D03 193 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 TBX15Q96SF7 602 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 NUDT22Q9BRQ3 303 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 PELI2Q9HAT8 420 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 FSCN3Q9NQT6 498 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 EHFQ9NZC4 300 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 GNG13Q9P2W3 67 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 FBXL7Q9UJT9 491 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 PITPNC1Q9UKF7 332 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 GAB2Q9UQC2 676 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 FAM208BQ5VWN6 2430 aa3.9□□□□□ -1.79
DEPDC1-202ENST00000456315 COL4A2P08572 1712 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 SMCO3A2RU48 225 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 PRSS37A4D1T9 235 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 LRRC3CA6NJW4 275 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 ZFP92A6NM28 416 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 UMODP07911 640 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 CHRM2P08172 466 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 THEGLP0DJG4 465 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 CD38P28907 300 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF93P35789 620 aaPredicted RBP3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 RPL23P62829 140 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF154Q13106 437 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 SHHQ15465 462 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 HNRNPA1L2Q32P51 320 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 AWAT2Q6E213 333 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 LHFPL4Q7Z7J7 247 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 MRGPRGQ86SM5 289 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 WFDC8Q8IUA0 241 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF100Q8IYN0 542 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 ZDHHC23Q8IYP9 409 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 ARL6IP6Q8N6S5 226 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 RTN4IP1Q8WWV3 396 aaPredicted RBP3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 RSC1A1Q92681 617 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 MRGPRX4Q96LA9 322 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 ZPBPQ9BS86 351 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 MRI1Q9BV20 369 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 LMAN2LQ9H0V9 348 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 HIPK2Q9H2X6 1198 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 HHLA2Q9UM44 414 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 HIVEP3Q5T1R4 2406 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 A0A087WWC5 75 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 SYT7O43581 403 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 FGF7P21781 194 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 CAMLGP49069 296 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 RAB5CP51148 216 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 CCR4P51679 360 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 PIGPP57054 158 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 RPL15P61313 204 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 CLN3Q13286 438 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 BATFQ16520 125 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 C20orf204Q6ZNR8 217 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 SLC25A26Q70HW3 274 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 DEFB128Q7Z7B8 93 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 C11orf42Q8N5U0 333 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 OR5L1Q8NGL2 311 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 NUS1Q96E22 293 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 PNRC2Q9NPJ4 139 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 TMED3Q9Y3Q3 217 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 MTCH2Q9Y6C9 303 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 ZNF780BQ9Y6R6 833 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 TRAV39A0A0B4J263 110 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 CRYM-AS1A6NIL9 109 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 AQP7O14520 342 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 CLDN14O95500 239 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 DUSP3P51452 185 aaPredicted RBP3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 HLA-DRB3P79483 266 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 IL13RA2Q14627 380 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 TANGO2Q6ICL3 276 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 TMEM144Q7Z5S9 345 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 C9orf40Q8IXQ3 194 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 COMMD1Q8N668 190 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 OR10V1Q8NGI7 309 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 UBALD1Q8TB05 177 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 TMEM204Q9BSN7 226 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 MCRIP2Q9BUT9 160 aaKnown RBP3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 OR2J1Q9GZK6 312 aa3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 FGF23Q9GZV9 251 aaPredicted RBP3.89□□□□□ -1.79
DEPDC1-202ENST00000456315 TAAR3PQ9P1P4 343 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms