RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 GSTT2P0CG29 244 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 KIR2DS4P43632 304 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 TAS2R31P59538 309 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 KIR2DS1Q14954 304 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 ZFP69Q49AA0 526 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 BEX5Q5H9J7 111 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 ZNF880Q6PDB4 577 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 GAPTQ8N292 157 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 SPICQ8N5J4 248 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 ERGIC1Q969X5 290 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 DECR2Q9NUI1 292 aa12.01□□□□□ -0.49
USP39-207ENST00000450066 TRDCB7Z8K6 153 aa12□□□□□ -0.49
USP39-207ENST00000450066 E7EQL1 145 aa12□□□□□ -0.49
USP39-207ENST00000450066 LHBP01229 141 aa12□□□□□ -0.49
USP39-207ENST00000450066 GNLYP22749 145 aa12□□□□□ -0.49
USP39-207ENST00000450066 ZNF497Q6ZNH5 498 aa12□□□□□ -0.49
USP39-207ENST00000450066 C20orf204Q6ZNR8 217 aa12□□□□□ -0.49
USP39-207ENST00000450066 GCSAMQ8N6F7 178 aa12□□□□□ -0.49
USP39-207ENST00000450066 TMEM185AQ8NFB2 350 aa12□□□□□ -0.49
USP39-207ENST00000450066 DMRTB1Q96MA1 342 aa12□□□□□ -0.49
USP39-207ENST00000450066 C5orf66Q9H5L9 145 aa12□□□□□ -0.49
USP39-207ENST00000450066 SEBOXQ9HB31 216 aaPredicted RBP12□□□□□ -0.49
USP39-207ENST00000450066 GCM1Q9NP62 436 aa12□□□□□ -0.49
USP39-207ENST00000450066 DIDO1Q9BTC0 2240 aaKnown RBP12□□□□□ -0.49
USP39-207ENST00000450066 MEIKINA0A087WXM9 373 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 RFPL4AA6NLU0 287 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 C17orf100A8MU93 164 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 RFPL4AL1F8VTS6 287 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.99□□□□□ -0.49
USP39-207ENST00000450066 CD55P08174 381 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 ANXA3P12429 323 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 UQCRFS1P47985 274 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 UBE2MP61081 183 aaKnown RBP11.99□□□□□ -0.49
USP39-207ENST00000450066 HOXA4Q00056 320 aaPredicted RBP11.99□□□□□ -0.49
USP39-207ENST00000450066 DHRS2Q13268 280 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 ZNF808Q8N4W9 903 aaPredicted RBP11.99□□□□□ -0.49
USP39-207ENST00000450066 ADAD2Q8NCV1 583 aaKnown RBP11.99□□□□□ -0.49
USP39-207ENST00000450066 DHRS9Q9BPW9 319 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 LIME1Q9H400 295 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 ZNF222Q9UK12 451 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 RNF115Q9Y4L5 304 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 NPTNQ9Y639 398 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 HIVEP3Q5T1R4 2406 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 CHD3Q12873 2000 aaKnown RBP11.99□□□□□ -0.49
USP39-207ENST00000450066 M0R233 179 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 FABP7O15540 132 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 PSPNO60542 156 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 HLA-AP01891 365 aaKnown RBP11.99□□□□□ -0.49
USP39-207ENST00000450066 EGR1P18146 543 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 AGAP20933 346 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 ZBTB25P24278 435 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 APOBEC3AP31941 199 aaPredicted RBP11.99□□□□□ -0.49
USP39-207ENST00000450066 CEBPDP49716 269 aaPredicted RBP11.99□□□□□ -0.49
USP39-207ENST00000450066 TLE1Q04724 770 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 TMEM128Q5BJH2 165 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 MOB1BQ7L9L4 216 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 PLPPR1Q8TBJ4 325 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 Q8TCH9 128 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 RTBDNQ9BSG5 229 aaPredicted RBP11.99□□□□□ -0.49
USP39-207ENST00000450066 ICE1Q9Y2F5 2266 aa11.99□□□□□ -0.49
USP39-207ENST00000450066 CTXN2P0C2S0 81 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 AKR1C4P17516 323 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 FCGR2CP31995 323 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 GLP1RP43220 463 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 KCNJ3P48549 501 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 BAMBIQ13145 260 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 PPP1R1AQ13522 171 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 IGSF11Q5DX21 431 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 LYG2Q86SG7 212 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 DRAXINQ8NBI3 349 aaPredicted RBP11.98□□□□□ -0.49
USP39-207ENST00000450066 NEUROG1Q92886 237 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 ZNF436Q9C0F3 470 aaPredicted RBP11.98□□□□□ -0.49
USP39-207ENST00000450066 RNF7Q9UBF6 113 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 MGAT4CQ9UBM8 478 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 MGAT4AQ9UM21 535 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 WIPI2Q9Y4P8 454 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 C9orf170A2RU37 121 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 SIAH2O43255 324 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 SCTP09683 121 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 PSG2P11465 335 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 RCC1P18754 421 aaPredicted RBP11.98□□□□□ -0.49
USP39-207ENST00000450066 TNFRSF1AP19438 455 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 PRDX2P32119 198 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 IL13RA1P78552 427 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 DHODHQ02127 395 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 ATXN7L3Q14CW9 347 aaPredicted RBP11.98□□□□□ -0.49
USP39-207ENST00000450066 EFNB3Q15768 340 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 FAM209AQ5JX71 171 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 C12orf45Q8N5I9 185 aaPredicted RBP11.98□□□□□ -0.49
USP39-207ENST00000450066 OR2AK2Q8NG84 335 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 TRAF4Q9BUZ4 470 aaPredicted RBP11.98□□□□□ -0.49
USP39-207ENST00000450066 TMPRSS13Q9BYE2 586 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 DNAJB11Q9UBS4 358 aa11.98□□□□□ -0.49
USP39-207ENST00000450066 ROS1P08922 2347 aa11.97□□□□□ -0.49
USP39-207ENST00000450066 CLDN14O95500 239 aa11.97□□□□□ -0.49
USP39-207ENST00000450066 C1QBP02746 253 aa11.97□□□□□ -0.49
USP39-207ENST00000450066 TK1P04183 234 aa11.97□□□□□ -0.49
USP39-207ENST00000450066 PGAM2P15259 253 aa11.97□□□□□ -0.49
USP39-207ENST00000450066 COL10A1Q03692 680 aa11.97□□□□□ -0.49
USP39-207ENST00000450066 TESK1Q15569 626 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms