RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 LOXL1Q08397 574 aaPredicted RBP12.15□□□□□ -0.46
SHANK2-210ENST00000449116 PNLIPRP3Q17RR3 467 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 ESCO2Q56NI9 601 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 WDR25Q64LD2 544 aaPredicted RBP12.15□□□□□ -0.46
SHANK2-210ENST00000449116 GDPD3Q7L5L3 318 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 CCDC190Q86UF4 302 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 WFDC11Q8NEX6 87 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 PLPPR1Q8TBJ4 325 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 CYYR1Q96J86 154 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 REG4Q9BYZ8 158 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 AUNIPQ9H7T9 357 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 RABL2AQ9UBK7 228 aaPredicted RBP12.15□□□□□ -0.46
SHANK2-210ENST00000449116 AK3Q9UIJ7 227 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 ITGB1BP2Q9UKP3 347 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 RABL2BQ9UNT1 228 aa12.15□□□□□ -0.46
SHANK2-210ENST00000449116 MRPS7Q9Y2R9 242 aaKnown RBP12.15□□□□□ -0.46
SHANK2-210ENST00000449116 PRRC2AP48634 2157 aaKnown RBP12.15□□□□□ -0.47
SHANK2-210ENST00000449116 NOTCH2Q04721 2471 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 CCDC168Q8NDH2 2452 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 FUOMA2VDF0 154 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 TMEM235A6NFC5 223 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 FABP12A6NFH5 140 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 RNF223E7ERA6 249 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 CA11O75493 328 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 HLA-DQB1P01920 261 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 ETV6P41212 452 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 GNB2P62879 340 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 AESQ08117 197 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 MADCAM1Q13477 382 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 IL18Q14116 193 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 EDDM3AQ14507 147 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 KRBOX4Q5JUW0 171 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 SPANXN2Q5MJ10 180 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 HACD4Q5VWC8 232 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 RSBN1Q5VWQ0 802 aaPredicted RBP12.14□□□□□ -0.47
SHANK2-210ENST00000449116 OLFML2AQ68BL7 652 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 FGFRL1Q8N441 504 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 C15orf40Q8WUR7 153 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 DYRK2Q92630 601 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 COQ2Q96H96 371 aa12.14□□□□□ -0.47
SHANK2-210ENST00000449116 SSBP3Q9BWW4 388 aaPredicted RBP12.14□□□□□ -0.47
SHANK2-210ENST00000449116 TMEM30CPA0ZSE6 113 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 H7C1Q1 480 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 MELTFP08582 738 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 CD3GP09693 182 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 IL2RGP31785 369 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 P2RX3P56373 397 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 EDDM3BP56851 147 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 GNG2P59768 71 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 MRPS15P82914 257 aaKnown RBP12.13□□□□□ -0.47
SHANK2-210ENST00000449116 PITPNAQ00169 270 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 ARFRP1Q13795 201 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 C11orf91Q3C1V1 193 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 SLC35E4Q6ICL7 350 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 PYHIN1Q6K0P9 492 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 FAM131AQ6UXB0 335 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 ZNF497Q6ZNH5 498 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 SNX29P2Q8IUI4 249 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 GAPTQ8N292 157 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 CMSS1Q9BQ75 279 aaKnown RBP12.13□□□□□ -0.47
SHANK2-210ENST00000449116 SOSTQ9BQB4 213 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 RIMS4Q9H426 269 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-210ENST00000449116 ING3Q9NXR8 418 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 ELF5Q9UKW6 265 aaPredicted RBP12.13□□□□□ -0.47
SHANK2-210ENST00000449116 V9GYH0 126 aa12.13□□□□□ -0.47
SHANK2-210ENST00000449116 TRBV23-1A0A0A0MS06 115 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 A0A0G2JMP0 313 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 A0A0X1KG70 313 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 A8MXK9 166 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 PHF1O43189 567 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-210ENST00000449116 ECDO95905 644 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-210ENST00000449116 PTHLHP12272 177 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 PTBP1P26599 531 aaKnown RBP eCLIP12.12□□□□□ -0.477e-8■■■■□ 24.5
SHANK2-210ENST00000449116 PRSS3P35030 304 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 BTN2A1Q7KYR7 527 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 TPRX1Q8N7U7 411 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 OR4M2Q8NGB6 313 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 H1FXQ92522 213 aaKnown RBP12.12□□□□□ -0.47
SHANK2-210ENST00000449116 ABHD1Q96SE0 405 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 HDHD3Q9BSH5 251 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-210ENST00000449116 DCTN5Q9BTE1 182 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 NCOR1P1Q9H4R4 102 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 CHMP1AQ9HD42 196 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-210ENST00000449116 C12orf4Q9NQ89 552 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 KIF25Q9UIL4 384 aa12.12□□□□□ -0.47
SHANK2-210ENST00000449116 MEIKINA0A087WXM9 373 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 TRBV6-6A0A0A6YYG2 114 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 ODAMA1E959 279 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 KIAA1324LA8MWY0 1029 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-210ENST00000449116 FAM157AC9JC47 383 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 FOXH1O75593 365 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 NAPSAO96009 420 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 MT-ND4P03905 459 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 GLIPR1P48060 266 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 RPL31P62899 125 aaKnown RBP12.11□□□□□ -0.47
SHANK2-210ENST00000449116 MRPS10P82664 201 aaKnown RBP12.11□□□□□ -0.47
SHANK2-210ENST00000449116 CD276Q5ZPR3 534 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 MRPL30Q8TCC3 161 aaKnown RBP12.11□□□□□ -0.47
SHANK2-210ENST00000449116 NUDCD2Q8WVJ2 157 aa12.11□□□□□ -0.47
SHANK2-210ENST00000449116 GCDHQ92947 438 aaPredicted RBP12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms