RNA–Protein interactions for RNA: ENST00000449062.1

RTFDC1-204, Transcript of Protein RTF2 homolog, humanhuman

TSL 5

Gene RTFDC1, Length 852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-204ENST00000449062 GPER1Q99527 375 aa11.37□□□□□ -0.59
RTFDC1-204ENST00000449062 ZNF184Q99676 751 aaPredicted RBP11.37□□□□□ -0.59
RTFDC1-204ENST00000449062 ZNF696Q9H7X3 374 aa11.37□□□□□ -0.59
RTFDC1-204ENST00000449062 FOXJ3Q9UPW0 622 aa11.37□□□□□ -0.59
RTFDC1-204ENST00000449062 ERGIC3Q9Y282 383 aa11.37□□□□□ -0.59
RTFDC1-204ENST00000449062 TRGV10A0A0A0MS01 117 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 IGHV2-26A0A0B4J1V2 119 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 FUOMA2VDF0 154 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 HTR3BO95264 441 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 IGLV1-47P01700 117 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 ARG1P05089 322 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 CD34P28906 385 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 RAB13P51153 203 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 DYNLT3P51808 116 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 PPP3R1P63098 170 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 RSU1Q15404 277 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 KRBOX4Q5JUW0 171 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 CCBE1Q6UXH8 406 aaPredicted RBP11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 PLPPR1Q8TBJ4 325 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 CITED1Q99966 193 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 ANKRD60Q9BZ19 345 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 METTL9Q9H1A3 318 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 PPIL3Q9H2H8 161 aaKnown RBP11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 ING4Q9UNL4 249 aa11.36□□□□□ -0.59
RTFDC1-204ENST00000449062 CMYA5Q8N3K9 4069 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 A0A087X0M5 115 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 KBTBD11-OT1A0A1B0GTJ5 212 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 PNMA8CA0A1B0GUJ8 204 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 A0A1B0GX30 115 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 A0A1W2PP11 408 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 BTBD17A6NE02 478 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 FAM90A22PA8MWA6 464 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 H0YHG0 523 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 MYL12BO14950 172 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 SC5DO75845 299 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 JUNBP17275 347 aaPredicted RBP11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 CDK2P24941 298 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 INSL4Q14641 139 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 SPHARQ15513 63 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 SSX2Q16385 188 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 LY6EQ16553 131 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 MINOS1Q5TGZ0 78 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 PRAMEF5Q5TYX0 476 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 RSBN1Q5VWQ0 802 aaPredicted RBP11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 ABHD12Q8N2K0 398 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 OSR2Q8N2R0 312 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 OR4P4Q8NGL7 312 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 MYDGFQ969H8 173 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 CLEC7AQ9BXN2 247 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 FBLN5Q9UBX5 448 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 KIF25Q9UIL4 384 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 ST3GAL6Q9Y274 331 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 RNF114Q9Y508 228 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 MINOS1-NBL1R4GNA1 71 aa11.35□□□□□ -0.59
RTFDC1-204ENST00000449062 A6NDX4 124 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 ERICH4A6NGS2 130 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 NPIPB11E5RHQ5 1161 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 LY6LH3BQJ8 138 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 GEMIN2O14893 280 aaKnown RBP11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 CHST1O43916 411 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 KIR2DS4P43632 304 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 RBM11P57052 281 aaKnown RBP11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 GPR50Q13585 617 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 ATXN7L3Q14CW9 347 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 ACSM3Q53FZ2 586 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 PAN3Q58A45 887 aaKnown RBP11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 DHRS7BQ6IAN0 325 aaPredicted RBP11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 MS4A15Q8N5U1 240 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 SUMF2Q8NBJ7 301 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 OR13A1Q8NGR1 328 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 MND1Q9BWT6 205 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 GAL3ST2Q9H3Q3 398 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 SCN3BQ9NY72 215 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 OR6C3Q9NZP0 311 aa11.34□□□□□ -0.59
RTFDC1-204ENST00000449062 ZNF729A6NN14 1252 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 ZNF780AO75290 641 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 CRHBPP24387 322 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 KCNJ3P48549 501 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 DYNC1I2Q13409 638 aaKnown RBP11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 TPBGQ13641 420 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 SLC22A6Q4U2R8 563 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 OR52W1Q6IF63 320 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 TRAPPC6BQ86SZ2 158 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 LRRTM1Q86UE6 522 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 RTN4RL2Q86UN3 420 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 ZNF565Q8N9K5 539 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 OR4D6Q8NGJ1 314 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 MUL1Q969V5 352 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 FOXRED1Q96CU9 486 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 KIRREL1Q96J84 757 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 DPCDQ9BVM2 203 aaPredicted RBP11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 BARHL1Q9BZE3 327 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 FAM192AQ9GZU8 254 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 ZNF286AQ9HBT8 521 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 ING3Q9NXR8 418 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 DPM3Q9P2X0 92 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 CKLFQ9UBR5 152 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 TPRKBQ9Y3C4 175 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 NOTCH3Q9UM47 2321 aa11.33□□□□□ -0.6
RTFDC1-204ENST00000449062 MEIKINA0A087WXM9 373 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 294.4 ms