RNA–Protein interactions for RNA: ENST00000447654.5

HMGA1-205, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-205ENST00000447654 PIGPP57054 158 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 DGAT2L6Q6ZPD8 337 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 OR10S1Q8NGN2 331 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 CIB3Q96Q77 187 aaPredicted RBP16.68■□□□□ 0.26
HMGA1-205ENST00000447654 VN1R1Q9GZP7 353 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 HSPB7Q9UBY9 170 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 SLC45A2Q9UMX9 530 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 FRYLO94915 3013 aa16.68■□□□□ 0.26
HMGA1-205ENST00000447654 IGSF23A1L1A6 192 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 NDUFB8O95169 186 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 ESDP10768 282 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 TFPI2P48307 235 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 DCAF7P61962 342 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 KCNIP4Q6PIL6 250 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 LYZL2Q7Z4W2 148 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 TMEM123Q8N131 208 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 OR56B2PQ8NGI1 322 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 OR52M1Q8NGK5 317 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 RERGQ96A58 199 aaPredicted RBP16.67■□□□□ 0.26
HMGA1-205ENST00000447654 OR51I2Q9H344 312 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 TMEM9BQ9NQ34 198 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 A0A0J9YY10 115 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 FAM221AA4D161 298 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 HPNP05981 417 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 CD55P08174 381 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 TUBG1P23258 451 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 TPPP2P59282 170 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 ERVS71-1P61550 626 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 SRPXP78539 464 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 LYG1Q8N1E2 194 aa16.67■□□□□ 0.26
HMGA1-205ENST00000447654 DAZLQ92904 295 aaKnown RBP16.67■□□□□ 0.26
HMGA1-205ENST00000447654 FAM24AA6NFZ4 105 aa16.66■□□□□ 0.26
HMGA1-205ENST00000447654 HHEXQ03014 270 aa16.66■□□□□ 0.26
HMGA1-205ENST00000447654 CA13Q8N1Q1 262 aa16.66■□□□□ 0.26
HMGA1-205ENST00000447654 TMEM252Q8N6L7 170 aa16.66■□□□□ 0.26
HMGA1-205ENST00000447654 ZNF738Q8NE65 137 aa16.66■□□□□ 0.26
HMGA1-205ENST00000447654 TMEM171Q8WVE6 324 aa16.66■□□□□ 0.26
HMGA1-205ENST00000447654 MSI2Q96DH6 328 aaKnown RBP16.66■□□□□ 0.26
HMGA1-205ENST00000447654 LRRC61Q9BV99 259 aa16.66■□□□□ 0.26
HMGA1-205ENST00000447654 WDFY3Q8IZQ1 3526 aa16.66■□□□□ 0.26
HMGA1-205ENST00000447654 PCDH15Q96QU1 1955 aa16.66■□□□□ 0.26
HMGA1-205ENST00000447654 B4DGG1 531 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 ATXN7O15265 892 aaPredicted RBP16.65■□□□□ 0.26
HMGA1-205ENST00000447654 KBTBD11O94819 623 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 IGHMP01871 453 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 OR5G3P0C626 314 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 SLC35E2P0CK97 266 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 WNT5AP41221 380 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 CCR5P51681 352 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 ADIRFQ15847 76 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 ABCA11PQ4W5N1 156 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 ZNF787Q6DD87 383 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 SLC25A24Q6NUK1 477 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 CBLN3Q6UW01 205 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 ABCA7Q8IZY2 2146 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 OR2V1Q8NHB1 315 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 RTN4IP1Q8WWV3 396 aaPredicted RBP16.65■□□□□ 0.26
HMGA1-205ENST00000447654 SPIN2AQ99865 258 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 SPIN2BQ9BPZ2 258 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 WIPI2Q9Y4P8 454 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 KIR2DS5A0A0G2JLQ3 304 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 A0A0G2JNG1 304 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 ZNF878C9JN71 531 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 F6UZH7 168 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 KIR2DS3K7RE56 304 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 TTRP02766 147 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 SQSTM1Q13501 440 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 KIR2DS5Q14953 304 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.65■□□□□ 0.26
HMGA1-205ENST00000447654 OR5C1Q8NGR4 320 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 VSTM2LQ96N03 204 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 SMIM7Q9BQ49 75 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 ZNF552Q9H707 407 aaPredicted RBP16.65■□□□□ 0.26
HMGA1-205ENST00000447654 FAM206AQ9NX38 181 aa16.65■□□□□ 0.26
HMGA1-205ENST00000447654 PTRH2Q9Y3E5 179 aaKnown RBP16.65■□□□□ 0.26
HMGA1-205ENST00000447654 CACNA1CQ13936 2221 aa16.64■□□□□ 0.26
HMGA1-205ENST00000447654 LOC105371242A0A075B767 164 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 A0A1W2PPC4 97 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 ZNF823P16415 610 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 ZNF20P17024 532 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 PRSS8Q16651 343 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 TIPARPQ7Z3E1 657 aaKnown RBP16.64■□□□□ 0.25
HMGA1-205ENST00000447654 REPIN1Q9BWE0 567 aaKnown RBP16.64■□□□□ 0.25
HMGA1-205ENST00000447654 PECRQ9BY49 303 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 TXNIPQ9H3M7 391 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 IGHV2-70DA0A0C4DH43 119 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 TMEM250H0YL14 139 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 DDAH2O95865 285 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 ZNF728P0DKX0 622 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 CTSEP14091 401 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 CTLA4P16410 223 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 RPL15P61313 204 aaKnown RBP16.64■□□□□ 0.25
HMGA1-205ENST00000447654 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.64■□□□□ 0.25
HMGA1-205ENST00000447654 MPV17LQ2QL34 196 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 OR4N2Q8NGD1 307 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 CMTM2Q8TAZ6 248 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 RASL10BQ96S79 203 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 ATP5SQ99766 215 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 ZNF319Q9P2F9 582 aa16.64■□□□□ 0.25
HMGA1-205ENST00000447654 LRIT1Q9P2V4 623 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms