RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 SPIN2AQ99865 258 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 SPIN2BQ9BPZ2 258 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 SLC5A7Q9GZV3 580 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 NAA60Q9H7X0 242 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 DYNLRB1Q9NP97 96 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 C13orf42A0A1B0GVH6 325 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 A0A1B0GW55 424 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 A0A1B0GWJ7 208 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 NKX6-3A6NJ46 265 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 HMSDA8MTL9 139 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 C1QTNF9BB2RNN3 333 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 H0YL77 283 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 GPR31O00270 319 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 HSPB6O14558 160 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 RGS13O14921 159 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 SPRY3O43610 288 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 TSC22D2O75157 780 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 PPYP01298 95 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 RLN2P04090 185 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 C1QTNF9P0C862 333 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 DUX4L2P0CJ85 424 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 DUX4L3P0CJ86 424 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 DUX4L4P0CJ87 422 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 DUX4L5P0CJ88 424 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 DUX4L6P0CJ89 424 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 DUX4L7P0CJ90 424 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 CFHR2P36980 270 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 FAM209AQ5JX71 171 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 SLC35E4Q6ICL7 350 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 ADAD2Q8NCV1 583 aaKnown RBP5.11□□□□□ -1.59
VPS50-205ENST00000441602 TMEM171Q8WVE6 324 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 DYRK2Q92630 601 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 PRORYQ9H606 182 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 TMEM165Q9HC07 324 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 KCNJ16Q9NPI9 418 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 RNF7Q9UBF6 113 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 DUX4Q9UBX2 424 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 IL19Q9UHD0 177 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 OPN4Q9UHM6 478 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 WIPI2Q9Y4P8 454 aa5.11□□□□□ -1.59
VPS50-205ENST00000441602 TRAV24A0A0B4J272 114 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 RFPL4AA6NLU0 287 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 FAM90A27PA6NNH2 459 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 RNF212BA8MTL3 300 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 RFPL4AL1F8VTS6 287 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 SMLR1H3BR10 107 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 ABCD4O14678 606 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 IFNA7P01567 189 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 AADACP22760 399 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 IL2RGP31785 369 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 SRSF4Q08170 494 aaKnown RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 TESK1Q15569 626 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 FBXL19-AS1Q494R0 122 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 BEX5Q5H9J7 111 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 CLEC18BQ6UXF7 455 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 WDR82Q6UXN9 313 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 WDR86Q86TI4 376 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 PIP4P2Q8N4L2 257 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 BOLLQ8N9W6 283 aaKnown RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 MRPL30Q8TCC3 161 aaKnown RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 RTN4IP1Q8WWV3 396 aaPredicted RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 C5orf66Q9H5L9 145 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 HES4Q9HCC6 221 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 ERRFI1Q9UJM3 462 aaPredicted RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 UBE2J1Q9Y385 318 aaPredicted RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 RTTNQ86VV8 2226 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 IGKV1D-8A0A087WSZ0 117 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 A0A0D9SG52 128 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 CRYM-AS1A6NIL9 109 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 F8VVB4 439 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 F8VWA3 439 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 ERVH48-1M5A8F1 160 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 SLC33A1O00400 549 aaPredicted RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 SPINT2O43291 252 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 SIX6O95475 246 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 PTBP3O95758 552 aaKnown RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 NFYAP23511 347 aaPredicted RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 LUMP51884 338 aaPredicted RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 PIGPP57054 158 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 RAB14P61106 215 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 RND3P61587 244 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 SORDQ00796 357 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 ESCO2Q56NI9 601 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 AADACL3Q5VUY0 350 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 ZNF880Q6PDB4 577 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 C9orf62Q8N4C0 152 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 INO80EQ8NBZ0 244 aaPredicted RBP5.1□□□□□ -1.59
VPS50-205ENST00000441602 OR5D13Q8NGL4 314 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 ITLN1Q8WWA0 313 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 C2orf50Q96LR7 162 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 OR2V2Q96R30 315 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 CABLES2Q9BTV7 478 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 CA10Q9NS85 328 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 DECR2Q9NUI1 292 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 OOEPA6NGQ2 149 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 ZSCAN5BA6NJL1 495 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 SRRM5B3KS81 715 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 LMO1P25800 156 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 SERPINF1P36955 418 aa5.1□□□□□ -1.59
VPS50-205ENST00000441602 BAMBIQ13145 260 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms