RNA–Protein interactions for RNA: ENST00000441074.3

LTBR-203, Transcript of lymphotoxin beta receptor, humanhuman

TSL 1 (best)

Gene LTBR, Length 2,327 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-203ENST00000441074 ALKBH4Q9NXW9 302 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 GVINP1Q7Z2Y8 2422 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 LOC102723971A0A1B0GUV8 181 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 LNP1A1A4G5 178 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 IGSF23A1L1A6 192 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 PROB1E7EW31 1015 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 STMND1H3BQB6 276 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 GEMIN2O14893 280 aaKnown RBP10.32□□□□□ -0.76
LTBR-203ENST00000441074 DFFBO76075 338 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 IL18BPO95998 194 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 CCL4P13236 92 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 ZNF133P52736 654 aaPredicted RBP10.32□□□□□ -0.76
LTBR-203ENST00000441074 TLE4Q04727 773 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 COA6Q5JTJ3 125 aaKnown RBP10.32□□□□□ -0.76
LTBR-203ENST00000441074 OR1P1Q8NH06 330 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 OR4X1Q8NH49 305 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 CA5BP1Q8WTZ4 195 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 HAS2Q92819 552 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 HDHD3Q9BSH5 251 aaPredicted RBP10.32□□□□□ -0.76
LTBR-203ENST00000441074 PARD6AQ9NPB6 346 aa10.32□□□□□ -0.76
LTBR-203ENST00000441074 SCRG1O75711 98 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 CEACAM1P13688 526 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 APLNRP35414 380 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 BIDP55957 195 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 C17orf67Q0P5P2 114 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 TSPO2Q5TGU0 170 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 FAM90A2PQ658T7 463 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 OR10A7Q8NGE5 316 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 TMEM171Q8WVE6 324 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 ANGPTL4Q9BY76 406 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 CTDSP1Q9GZU7 261 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 SEMA5BQ9P283 1151 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 SLC7A11Q9UPY5 501 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 POLR1DQ9Y2S0 133 aa10.31□□□□□ -0.76
LTBR-203ENST00000441074 TRAV1-1A0A0B4J248 108 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 ZNF850A8MQ14 1090 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 MSTNO14793 375 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 ATXN7O15265 892 aaPredicted RBP10.3□□□□□ -0.76
LTBR-203ENST00000441074 CDS2O95674 445 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 ANOS1P23352 680 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 PHLDA2Q53GA4 152 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 THEM4Q5T1C6 240 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 FAM57BQ71RH2 274 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 NAXEQ8NCW5 288 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 ATG101Q9BSB4 218 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 CABLES2Q9BTV7 478 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 EMC6Q9BV81 110 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 MRPL13Q9BYD1 178 aaKnown RBP10.3□□□□□ -0.76
LTBR-203ENST00000441074 SRD5A3Q9H8P0 318 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 CALHM2Q9HA72 323 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 SLC2A9Q9NRM0 540 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 NXT1Q9UKK6 140 aaKnown RBP10.3□□□□□ -0.76
LTBR-203ENST00000441074 PHF3Q92576 2039 aaKnown RBP10.3□□□□□ -0.76
LTBR-203ENST00000441074 VSTM2BA6NLU5 285 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 ZNF705GA8MUZ8 300 aaPredicted RBP10.3□□□□□ -0.76
LTBR-203ENST00000441074 TK1P04183 234 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 DTYMKP23919 212 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 GABREP78334 506 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 SLC25A26Q70HW3 274 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 CMTM1Q8IZ96 169 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 TMEM252Q8N6L7 170 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 ADPRHL1Q8NDY3 354 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 NOXO1Q8NFA2 376 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 OR5L1Q8NGL2 311 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 NPRL2Q8WTW4 380 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 ADGRG7Q96K78 797 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 VAX2Q9UIW0 290 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 B3GALT1Q9Y5Z6 326 aa10.3□□□□□ -0.76
LTBR-203ENST00000441074 LIPT2A6NK58 231 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 FCGR2AP12318 317 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 ZFP36L1Q07352 338 aaKnown RBP10.29□□□□□ -0.76
LTBR-203ENST00000441074 DMRTC1Q5HYR2 192 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 ZNF283Q8N7M2 679 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 SLC35G3Q8N808 338 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 R3HDM4Q96D70 268 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 Q96M66 194 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 SNHG12Q9BXW3 62 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 ELL3Q9HB65 397 aaPredicted RBP10.29□□□□□ -0.76
LTBR-203ENST00000441074 SDF2L1Q9HCN8 221 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 LYRM2Q9NU23 88 aaPredicted RBP10.29□□□□□ -0.76
LTBR-203ENST00000441074 CISD1Q9NZ45 108 aaKnown RBP10.29□□□□□ -0.76
LTBR-203ENST00000441074 PCNX3Q9H6A9 2034 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 FER1L5A0AVI2 2057 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 ETV2O00321 342 aaPredicted RBP10.29□□□□□ -0.76
LTBR-203ENST00000441074 PHF1O43189 567 aaPredicted RBP10.29□□□□□ -0.76
LTBR-203ENST00000441074 CER1O95813 267 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 GLI4P10075 376 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 OMGP23515 440 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 G0S2P27469 103 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 NKX2-1P43699 371 aaPredicted RBP10.29□□□□□ -0.76
LTBR-203ENST00000441074 RRADP55042 308 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 UCP3P55916 312 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 FXYD4P59646 89 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 RAB11AP62491 216 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 COL10A1Q03692 680 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 RAB35Q15286 201 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 NKAIN1Q4KMZ8 207 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 P4HA3Q7Z4N8 544 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 CCDC71LQ8N9Z2 235 aa10.29□□□□□ -0.76
LTBR-203ENST00000441074 OR5C1Q8NGR4 320 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms