RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 SH3BGRL3Q9H299 93 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 DECR2Q9NUI1 292 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 MSRB2Q9Y3D2 182 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 DMRT1Q9Y5R6 373 aa7.02□□□□□ -1.29
HPS4-205ENST00000429411 C5orf49A4QMS7 147 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 SRSF10O75494 262 aaKnown RBP7.01□□□□□ -1.29
HPS4-205ENST00000429411 CST4P01036 141 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 IGHMP01871 453 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 HLA-HP01893 362 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 RPS16P62249 146 aaKnown RBP7.01□□□□□ -1.29
HPS4-205ENST00000429411 AWAT1Q58HT5 328 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 VAX1Q5SQQ9 334 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 ZNF468Q5VIY5 522 aaPredicted RBP7.01□□□□□ -1.29
HPS4-205ENST00000429411 TMEM123Q8N131 208 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 LGI3Q8N145 548 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 OSR2Q8N2R0 312 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 HAS2Q92819 552 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 BSCL2Q96G97 398 aaPredicted RBP7.01□□□□□ -1.29
HPS4-205ENST00000429411 EAF1Q96JC9 268 aaPredicted RBP7.01□□□□□ -1.29
HPS4-205ENST00000429411 LYZL4Q96KX0 146 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 SSX3Q99909 188 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 BCO1Q9HAY6 547 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 FIGNL2A6NMB9 653 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 TK1P04183 234 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 MELTFP08582 738 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 HKR1P10072 659 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 ZNF708P17019 499 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 GPM6AP51674 278 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 ZNF133P52736 654 aaPredicted RBP7.01□□□□□ -1.29
HPS4-205ENST00000429411 SLAQ13239 276 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 RNFT1Q5M7Z0 435 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 AADACL3Q5VUY0 350 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 WDR74Q6RFH5 385 aaPredicted RBP7.01□□□□□ -1.29
HPS4-205ENST00000429411 DHRS11Q6UWP2 260 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 DNM1P46Q6ZS02 220 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 KMT5CQ86Y97 462 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 CCDC71LQ8N9Z2 235 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 NFAM1Q8NET5 270 aaPredicted RBP7.01□□□□□ -1.29
HPS4-205ENST00000429411 OR52M1Q8NGK5 317 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 OR1F12Q8NHA8 337 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 IP6K3Q96PC2 410 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 FOXB1Q99853 325 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 SLC2A9Q9NRM0 540 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 AKAP6Q13023 2319 aa7.01□□□□□ -1.29
HPS4-205ENST00000429411 A0A1W2PR80 420 aa7□□□□□ -1.29
HPS4-205ENST00000429411 CDX4O14627 284 aaPredicted RBP7□□□□□ -1.29
HPS4-205ENST00000429411 NKX2-1P43699 371 aaPredicted RBP7□□□□□ -1.29
HPS4-205ENST00000429411 CLDN15P56746 228 aa7□□□□□ -1.29
HPS4-205ENST00000429411 CLEC12BQ2HXU8 276 aa7□□□□□ -1.29
HPS4-205ENST00000429411 OR2B11Q5JQS5 317 aa7□□□□□ -1.29
HPS4-205ENST00000429411 AKR1C8PQ5T2L2 129 aa7□□□□□ -1.29
HPS4-205ENST00000429411 ZNF611Q8N823 705 aa7□□□□□ -1.29
HPS4-205ENST00000429411 SPXQ9BT56 116 aa7□□□□□ -1.29
HPS4-205ENST00000429411 PBDC1Q9BVG4 233 aa7□□□□□ -1.29
HPS4-205ENST00000429411 SUCNR1Q9BXA5 334 aa7□□□□□ -1.29
HPS4-205ENST00000429411 CHST5Q9GZS9 411 aa7□□□□□ -1.29
HPS4-205ENST00000429411 ZNF107Q9UII5 783 aaPredicted RBP7□□□□□ -1.29
HPS4-205ENST00000429411 PRR14LQ5THK1 2151 aa7□□□□□ -1.29
HPS4-205ENST00000429411 ZFP92A6NM28 416 aa7□□□□□ -1.29
HPS4-205ENST00000429411 E5RGE8 158 aa7□□□□□ -1.29
HPS4-205ENST00000429411 CBR3O75828 277 aa7□□□□□ -1.29
HPS4-205ENST00000429411 SERPINE2P07093 398 aa7□□□□□ -1.29
HPS4-205ENST00000429411 AADACP22760 399 aa7□□□□□ -1.29
HPS4-205ENST00000429411 S100GP29377 79 aa7□□□□□ -1.29
HPS4-205ENST00000429411 UBE2G2P60604 165 aa7□□□□□ -1.29
HPS4-205ENST00000429411 IL24Q13007 206 aa7□□□□□ -1.29
HPS4-205ENST00000429411 C3AR1Q16581 482 aa7□□□□□ -1.29
HPS4-205ENST00000429411 IZUMO4Q1ZYL8 232 aa7□□□□□ -1.29
HPS4-205ENST00000429411 EIF2S3LQ2VIR3 472 aaKnown RBP7□□□□□ -1.29
HPS4-205ENST00000429411 CPEB3Q8NE35 698 aaKnown RBP7□□□□□ -1.29
HPS4-205ENST00000429411 SLC30A7Q8NEW0 376 aa7□□□□□ -1.29
HPS4-205ENST00000429411 OIT3Q8WWZ8 545 aa7□□□□□ -1.29
HPS4-205ENST00000429411 NSG2Q9Y328 171 aa7□□□□□ -1.29
HPS4-205ENST00000429411 LRRK2Q5S007 2527 aa7□□□□□ -1.29
HPS4-205ENST00000429411 EML6Q6ZMW3 1958 aa7□□□□□ -1.29
HPS4-205ENST00000429411 MBPP02686 304 aaPredicted RBP7□□□□□ -1.29
HPS4-205ENST00000429411 EPHA8P29322 1005 aaPredicted RBP7□□□□□ -1.29
HPS4-205ENST00000429411 NPBWR2P48146 333 aa7□□□□□ -1.29
HPS4-205ENST00000429411 QRFPP83859 136 aa7□□□□□ -1.29
HPS4-205ENST00000429411 RUNX1Q01196 453 aa7□□□□□ -1.29
HPS4-205ENST00000429411 FABP9Q0Z7S8 132 aa7□□□□□ -1.29
HPS4-205ENST00000429411 ZNF528Q3MIS6 628 aa7□□□□□ -1.29
HPS4-205ENST00000429411 HIKESHIQ53FT3 197 aa7□□□□□ -1.29
HPS4-205ENST00000429411 PABPC1L2AQ5JQF8 200 aa7□□□□□ -1.29
HPS4-205ENST00000429411 NCMAPQ5T1S8 102 aa7□□□□□ -1.29
HPS4-205ENST00000429411 IL34Q6ZMJ4 242 aa7□□□□□ -1.29
HPS4-205ENST00000429411 SSX9Q7RTT3 188 aa7□□□□□ -1.29
HPS4-205ENST00000429411 ZNF100Q8IYN0 542 aa7□□□□□ -1.29
HPS4-205ENST00000429411 GLYATL2Q8WU03 294 aa7□□□□□ -1.29
HPS4-205ENST00000429411 NAT6Q93015 286 aa7□□□□□ -1.29
HPS4-205ENST00000429411 CPNE4Q96A23 557 aaPredicted RBP7□□□□□ -1.29
HPS4-205ENST00000429411 ZNF488Q96MN9 340 aa7□□□□□ -1.29
HPS4-205ENST00000429411 CITED2Q99967 270 aaPredicted RBP7□□□□□ -1.29
HPS4-205ENST00000429411 SRXN1Q9BYN0 137 aa7□□□□□ -1.29
HPS4-205ENST00000429411 NAA60Q9H7X0 242 aa7□□□□□ -1.29
HPS4-205ENST00000429411 PCNX1Q96RV3 2341 aa7□□□□□ -1.29
HPS4-205ENST00000429411 CENPEQ02224 2701 aa7□□□□□ -1.29
HPS4-205ENST00000429411 ZNF462Q96JM2 2506 aa6.99□□□□□ -1.29
HPS4-205ENST00000429411 DOCK11Q5JSL3 2073 aa6.99□□□□□ -1.29
HPS4-205ENST00000429411 A0A087X0M5 115 aa6.99□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms