RNA–Protein interactions for RNA: ENST00000428313.5

C9orf3-206, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best)

Gene C9orf3, Length 2,288 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-206ENST00000428313 OR6C6A6NF89 314 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 ZNF850A8MQ14 1090 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 GCH1P30793 250 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 SEC13P55735 322 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 EXT1Q16394 746 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 RNF151Q2KHN1 245 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 TMEM217Q8N7C4 229 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 ZNF738Q8NE65 137 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 OR10A5Q9H207 317 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 WNT6Q9Y6F9 365 aa13.94□□□□□ -0.18
C9orf3-206ENST00000428313 IGHV2-70DA0A0C4DH43 119 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 AQP7O14520 342 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 NPIPB7O75200 414 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 VENTXO95231 258 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 CEACAM5P06731 702 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 AADACP22760 399 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 IL3RAP26951 378 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 NPBWR2P48146 333 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 MEF2BQ02080 365 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-206ENST00000428313 ZNF154Q13106 437 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 ABHD12BQ7Z5M8 362 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-206ENST00000428313 PLEKHJ1Q9NW61 149 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 HSPB7Q9UBY9 170 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 SLC17A4Q9Y2C5 497 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 INSL6Q9Y581 213 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 COX11Q9Y6N1 276 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 PHF3Q92576 2039 aaKnown RBP13.93□□□□□ -0.18
C9orf3-206ENST00000428313 IGKV1-9A0A0C4DH69 117 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 F6UZH7 168 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 IL33O95760 270 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 CCR2P41597 374 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 RPS20P60866 119 aaKnown RBP13.93□□□□□ -0.18
C9orf3-206ENST00000428313 IGLV3-21P80748 117 aaPredicted RBP13.93□□□□□ -0.18
C9orf3-206ENST00000428313 MRPS34P82930 218 aaKnown RBP13.93□□□□□ -0.18
C9orf3-206ENST00000428313 ID3Q02535 119 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 FMODQ06828 376 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 FUT7Q11130 342 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 KISS1Q15726 138 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 LHX8Q68G74 356 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 C6orf201Q7Z4U5 140 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 COMMD2Q86X83 199 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 SUMF1Q8NBK3 374 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 ADAMTS18Q8TE60 1221 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 TMEM56Q96MV1 263 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 KLHDC3Q9BQ90 382 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 LAMTOR2Q9Y2Q5 125 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 TMEM56-RWDD3S4R434 201 aa13.93□□□□□ -0.18
C9orf3-206ENST00000428313 ZNF737O75373 536 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 UTS2O95399 124 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 ZNF17P17021 662 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 CTRLP40313 264 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 FXYD4P59646 89 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 RTP5Q14D33 572 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 CLEC12BQ2HXU8 276 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 MEX3BQ6ZN04 569 aaKnown RBP13.92□□□□□ -0.18
C9orf3-206ENST00000428313 DOK3Q7L591 496 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 C1QL2Q7Z5L3 287 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 TMEM144Q7Z5S9 345 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 ASB10Q8WXI3 467 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 HDHD3Q9BSH5 251 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-206ENST00000428313 PARD6GQ9BYG4 376 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-206ENST00000428313 TMEM222Q9H0R3 208 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 SHISA7A6NL88 538 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 TGFBR3LH3BV60 316 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 TMEM50AO95807 157 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 HLA-HP01893 362 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 RAC2P15153 192 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 UCP1P25874 307 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 COMPP49747 757 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-206ENST00000428313 FGF8P55075 233 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-206ENST00000428313 SLC25A24Q6NUK1 477 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 LILRA6Q6PI73 481 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 CRIP3Q6Q6R5 217 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 VN1R17PQ8TDU5 208 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 KCNK17Q96T54 332 aa13.92□□□□□ -0.18
C9orf3-206ENST00000428313 ARID1BQ8NFD5 2236 aaPredicted RBP13.92□□□□□ -0.18
C9orf3-206ENST00000428313 C3orf85A0A1B0GTC6 90 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 A0A1B0GUS0 222 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 GLI4P10075 376 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 CD99P14209 185 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 MPLP40238 635 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 SERF2P84101 59 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 OR8B12Q8NGG6 310 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 C11orf40Q8WZ69 217 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 DGAT2Q96PD7 388 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 ZNF286AQ9HBT8 521 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 RNF186Q9NXI6 227 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 DOCK8Q8NF50 2099 aa13.91□□□□□ -0.18
C9orf3-206ENST00000428313 PDGFBP01127 241 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-206ENST00000428313 GYPAP02724 150 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 CDKN1AP38936 164 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 MDH2P40926 338 aaKnown RBP13.9□□□□□ -0.18
C9orf3-206ENST00000428313 DAP3P51398 398 aaKnown RBP13.9□□□□□ -0.18
C9orf3-206ENST00000428313 CARD18P57730 90 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 CXorf66Q5JRM2 361 aaPredicted RBP13.9□□□□□ -0.18
C9orf3-206ENST00000428313 FAM57BQ71RH2 274 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 KMT5CQ86Y97 462 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 OR56B2PQ8NGI1 322 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 OR11L1Q8NGX0 322 aa13.9□□□□□ -0.18
C9orf3-206ENST00000428313 SCGB1C1Q8TD33 95 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms