RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 PXDC1Q5TGL8 231 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 TGIF2LYQ8IUE0 185 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 TGIF2LXQ8IUE1 241 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 DUS4LO95620 317 aaKnown RBP12.06□□□□□ -0.48
RPL28-202ENST00000426763 RRASP10301 218 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 ANK1P16157 1881 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 HOXD11P31277 338 aaPredicted RBP12.06□□□□□ -0.48
RPL28-202ENST00000426763 COL10A1Q03692 680 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 OR4A4PQ8NGN8 299 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 TMEM54Q969K7 222 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 PTX4Q96A99 478 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 TMEM45BQ96B21 275 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 LINC00470Q9BZP3 86 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 UQCC1Q9NVA1 299 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 CRYZL1O95825 349 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 EGR4Q05215 589 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 ZNF787Q6DD87 383 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 NTNG2Q96CW9 530 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 SLC25A32Q9H2D1 315 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 MRPL22Q9NWU5 206 aaKnown RBP12.06□□□□□ -0.48
RPL28-202ENST00000426763 TIMM9Q9Y5J7 89 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 BCL2L11O43521 198 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 MT-ND4LP03901 98 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 PRF1P14222 555 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 RPL31P62899 125 aaKnown RBP12.06□□□□□ -0.48
RPL28-202ENST00000426763 ZFP82Q8N141 532 aa12.06□□□□□ -0.48
RPL28-202ENST00000426763 NPIPB9F8W1W9 429 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 ONECUT2O95948 504 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 OR13C7P0DN81 318 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 M6PRP20645 277 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 RPS10P46783 165 aaKnown RBP12.05□□□□□ -0.48
RPL28-202ENST00000426763 GGNBP1Q5YKI7 109 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 FAHD2BQ6P2I3 314 aaPredicted RBP12.05□□□□□ -0.48
RPL28-202ENST00000426763 ACSM6Q6P461 480 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 Q6ZT83 130 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 FAHD2AQ96GK7 314 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 LRFN3Q9BTN0 628 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 KCNMB2Q9Y691 235 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 MTCL1Q9Y4B5 1905 aaKnown RBP12.05□□□□□ -0.48
RPL28-202ENST00000426763 C17orf51A8MQB3 221 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 CELA3AP09093 270 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 HNF1AP20823 631 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 UBE2G2P60604 165 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 C10orf128Q5T292 105 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 TBC1D26Q86UD7 250 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 OR8G5Q8NG78 346 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 ITLN1Q8WWA0 313 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 AMELYQ99218 206 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 PIPOXQ9P0Z9 390 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 NYNRINQ9P2P1 1898 aaKnown RBP12.05□□□□□ -0.48
RPL28-202ENST00000426763 CHD5Q8TDI0 1954 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 AESQ08117 197 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 TNXAQ16473 311 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 ATP6V1G2-DDX39BF2Z307 99 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 PPYP01298 95 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 RBPMSQ93062 196 aaKnown RBP12.05□□□□□ -0.48
RPL28-202ENST00000426763 R3HDM4Q96D70 268 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 ZNF488Q96MN9 340 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 PCDHGA9Q9Y5G4 932 aaKnown RBP12.05□□□□□ -0.48
RPL28-202ENST00000426763 INSIG2Q9Y5U4 225 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 KPTNQ9Y664 436 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 TIGITQ495A1 244 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 OR4F5Q8NH21 305 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 OR4F4Q96R69 305 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 RASL11BQ9BPW5 248 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 PRDM14Q9GZV8 571 aa12.05□□□□□ -0.48
RPL28-202ENST00000426763 SIRT4Q9Y6E7 314 aaPredicted RBP12.05□□□□□ -0.48
RPL28-202ENST00000426763 ANKRD36A6QL64 1941 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 FAM157AC9JC47 383 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 MGST3O14880 152 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 ISG15P05161 165 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 TMEM65Q6PI78 240 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 ZBTB34Q8NCN2 500 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 RAXQ9Y2V3 346 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 DVL1O14640 695 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 TAGLN2P37802 199 aaKnown RBP12.04□□□□□ -0.48
RPL28-202ENST00000426763 SUCLG1P53597 346 aaKnown RBP12.04□□□□□ -0.48
RPL28-202ENST00000426763 DVL1P1P54792 670 aaPredicted RBP12.04□□□□□ -0.48
RPL28-202ENST00000426763 RPUSD3Q6P087 351 aaKnown RBP12.04□□□□□ -0.48
RPL28-202ENST00000426763 C17orf82Q86X59 251 aaPredicted RBP12.04□□□□□ -0.48
RPL28-202ENST00000426763 TCTE3Q8IZS6 198 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 TMEM104Q8NE00 496 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 FNDC1Q4ZHG4 1894 aaPredicted RBP12.04□□□□□ -0.48
RPL28-202ENST00000426763 C19orf67A6NJJ6 358 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 TBX6O95947 436 aaPredicted RBP12.04□□□□□ -0.48
RPL28-202ENST00000426763 GZMKP49863 264 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 RPS4XP62701 263 aaKnown RBP12.04□□□□□ -0.48
RPL28-202ENST00000426763 HAGHQ16775 308 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 SHISA5Q8N114 240 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 FADS6Q8N9I5 356 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 LPAR2Q9HBW0 351 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 MRPS18CQ9Y3D5 142 aaKnown RBP12.04□□□□□ -0.48
RPL28-202ENST00000426763 OR2W1Q9Y3N9 320 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 OR5H1A6NKK0 313 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 FGF12P61328 243 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 ST3GAL2Q16842 350 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 FAM57AQ8TBR7 257 aa12.04□□□□□ -0.48
RPL28-202ENST00000426763 TRBV5-5A0A0J9YX44 114 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 HSBP1L1C9JCN9 74 aa12.03□□□□□ -0.48
RPL28-202ENST00000426763 GYPAP02724 150 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms