RNA–Protein interactions for RNA: ENST00000425518.5

SMARCC1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 3,827 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-202ENST00000425518 ZNF816-ZNF321PA0A0X1KG74 233 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 A0A1W2PPZ6 126 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 C3orf80F5H4A9 247 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 EPHA8P29322 1005 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 HAAOP46952 286 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 UCP3P55916 312 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 IZUMO4Q1ZYL8 232 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 WIPI1Q5MNZ9 446 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 SLC23A3Q6PIS1 610 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 SPSB3Q6PJ21 355 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 ASCL4Q6XD76 172 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF100Q8IYN0 542 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 SELENOHQ8IZQ5 122 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 IL22RA1Q8N6P7 574 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 KDF1Q8NAX2 398 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 IMMP1LQ96LU5 166 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 SPIN2AQ99865 258 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 SPIN2BQ9BPZ2 258 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 DUSP23Q9BVJ7 150 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 TOLLIPQ9H0E2 274 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 TMPRSS5Q9H3S3 457 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 IL36RNQ9UBH0 155 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 HS3ST3B1Q9Y662 390 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 PI4KAP42356 2102 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 IGKV1D-13A0A0B4J2D9 117 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 hCG_38984A0A1B0GV85 526 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 GJE1A6NN92 205 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 C9J4A7 227 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 TERTO14746 1132 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 CDS2O95674 445 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 TMEM50AO95807 157 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 RFPL3SP0C7P2 107 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 IGKV1-13P0DP09 117 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 COX6A1P12074 109 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 BCL3P20749 454 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 CXCL12P48061 93 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 RPL23AP62750 156 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 DLK1P80370 383 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 WDR5BQ86VZ2 330 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 CMTM1Q8IZ96 169 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 RNASE11Q8TAA1 199 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 ABHD3Q8WU67 409 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 FAM86C1Q9NVL1 165 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 COL5A1P20908 1838 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 OR6C6A6NF89 314 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 HLA-HP01893 362 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 P04436 131 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 GPM6AP51674 278 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 SRPXP78539 464 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 SRYQ05066 204 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 HEPN1Q6WQI6 88 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 THNSL2Q86YJ6 484 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 SPEM1Q8N4L4 309 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 OR56B2PQ8NGI1 322 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 OR10D3Q8NH80 312 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 CPT1CQ8TCG5 803 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 ZNF845Q96IR2 970 aaPredicted RBP6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 UNKLQ9H9P5 680 aaKnown RBP6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 WSB1Q9Y6I7 421 aa6.48□□□□□ -1.37
SMARCC1-202ENST00000425518 TTC28Q96AY4 2481 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 LY6G6EA0A0G2JKS1 128 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 SRP19P09132 144 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 EDN3P14138 238 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 PMELP40967 661 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 EXT1Q16394 746 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 C9orf152Q5JTZ5 239 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 TMEM42Q69YG0 159 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 OR51H1Q8NH63 302 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 EDARADDQ8WWZ3 215 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 MUCL1Q96DR8 90 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 GGACTQ9BVM4 153 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 LYRM2Q9NU23 88 aaPredicted RBP6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 COLQQ9Y215 455 aaPredicted RBP6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 U3KQA8 63 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 TGIF2-C20orf24A0A0A6YYL0 155 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 HS3ST1O14792 307 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 PITX3O75364 302 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 CXCL1P09341 107 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 S100A2P29034 98 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 OTX2P32243 289 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 HNF4GQ14541 408 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 HLA-BQ31612 363 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 HIKESHIQ53FT3 197 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 CPEB3Q8NE35 698 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 NIPSNAP3BQ9BS92 247 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 SF3B5Q9BWJ5 86 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 DOK5Q9P104 306 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 GNG13Q9P2W3 67 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 SLC22A20A6NK97 555 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 RPL36A-HNRNPH2H7BZ11 118 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 CYB5BO43169 146 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 KLF7O75840 302 aaPredicted RBP6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 SCAF4O95104 1147 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 CFIP05156 583 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 PCBD1P61457 104 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 LCN15Q6UWW0 184 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 SNIP1Q8TAD8 396 aaKnown RBP6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 Q8WTZ3 238 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 IL1F10Q8WWZ1 152 aa6.47□□□□□ -1.37
SMARCC1-202ENST00000425518 GPR35Q9HC97 309 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms