RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 CLEC4MQ9H2X3 399 aaPredicted RBP22.39■■□□□ 1.17
LDB1-202ENST00000425280 PRORYQ9H606 182 aa22.39■■□□□ 1.17
LDB1-202ENST00000425280 ATP23Q9Y6H3 246 aa22.39■■□□□ 1.17
LDB1-202ENST00000425280 CA7P43166 264 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 SRSF4Q08170 494 aaKnown RBP22.38■■□□□ 1.17
LDB1-202ENST00000425280 ZNF880Q6PDB4 577 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 TMEM165Q9HC07 324 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 PCNX1Q96RV3 2341 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 KIR2DS1A0A191URI9 304 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 HAND1O96004 215 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 NFYAP23511 347 aaPredicted RBP22.38■■□□□ 1.17
LDB1-202ENST00000425280 PTAFRP25105 342 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 KIR2DS4P43632 304 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 FXYD4P59646 89 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 KIR2DS1Q14954 304 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 ACP7Q6ZNF0 438 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 MOB3AQ96BX8 217 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 GON7Q9BXV9 100 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 MRPL37Q9BZE1 423 aaKnown RBP22.38■■□□□ 1.17
LDB1-202ENST00000425280 C1orf123Q9NWV4 160 aa22.38■■□□□ 1.17
LDB1-202ENST00000425280 AADACP22760 399 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 MDH2P40926 338 aaKnown RBP22.37■■□□□ 1.17
LDB1-202ENST00000425280 HERPUD1Q15011 391 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 NUP37Q8NFH4 326 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 PLPPR1Q8TBJ4 325 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 PRR13Q9NZ81 148 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 TREM2Q9NZC2 230 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 OR14J1Q9UGF5 321 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 SHANK1Q9Y566 2161 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 hCG_1807616A0A1W2PRN6 198 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 PLSCR5A0PG75 271 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 DPRXA6NFQ7 191 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 PTBP3O95758 552 aaKnown RBP22.37■■□□□ 1.17
LDB1-202ENST00000425280 CEBPDP49716 269 aaPredicted RBP22.37■■□□□ 1.17
LDB1-202ENST00000425280 ANKRD55Q3KP44 614 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 SHEQ5VZ18 495 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 ELMOD3Q96FG2 381 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 TAAR3PQ9P1P4 343 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 ZZEF1O43149 2961 aa22.37■■□□□ 1.17
LDB1-202ENST00000425280 A0A0B4J2A0 478 aa22.36■■□□□ 1.17
LDB1-202ENST00000425280 SSX8Q7RTT4 187 aa22.36■■□□□ 1.17
LDB1-202ENST00000425280 SHPKQ9UHJ6 478 aa22.36■■□□□ 1.17
LDB1-202ENST00000425280 IGKV1-6A0A0C4DH72 117 aa22.35■■□□□ 1.17
LDB1-202ENST00000425280 RCC1P18754 421 aaPredicted RBP22.35■■□□□ 1.17
LDB1-202ENST00000425280 ZNF497Q6ZNH5 498 aa22.35■■□□□ 1.17
LDB1-202ENST00000425280 CHD3Q12873 2000 aaKnown RBP22.35■■□□□ 1.17
LDB1-202ENST00000425280 BET1O15155 118 aa22.35■■□□□ 1.17
LDB1-202ENST00000425280 PPYP01298 95 aa22.35■■□□□ 1.17
LDB1-202ENST00000425280 CD8AP01732 235 aa22.35■■□□□ 1.17
LDB1-202ENST00000425280 RBMXP38159 391 aaKnown RBP22.35■■□□□ 1.17
LDB1-202ENST00000425280 UCP3P55916 312 aa22.35■■□□□ 1.17
LDB1-202ENST00000425280 HERV-K104P61576 105 aa22.35■■□□□ 1.17
LDB1-202ENST00000425280 OR5T2Q8NGG2 359 aa22.35■■□□□ 1.17
LDB1-202ENST00000425280 COQ8AQ8NI60 647 aa22.35■■□□□ 1.17
LDB1-202ENST00000425280 CHD8Q9HCK8 2581 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 CRYM-AS1A6NIL9 109 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 ABCD4O14678 606 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 SEC61A1P61619 476 aaKnown RBP22.34■■□□□ 1.17
LDB1-202ENST00000425280 SPRNQ5BIV9 151 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 GAPTQ8N292 157 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 LRRC29Q8WV35 223 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 MRPL24Q96A35 216 aaKnown RBP22.34■■□□□ 1.17
LDB1-202ENST00000425280 SEC22AQ96IW7 307 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 PDCD10Q9BUL8 212 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 GLS2Q9UI32 602 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 FAM25EA8MYX2 175 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 TK1P04183 234 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 LMO1P25800 156 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 PIGPP57054 158 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 SELENOVP59797 346 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 SORDQ00796 357 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 BSPH1Q075Z2 132 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 MEGF10Q96KG7 1140 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 WFIKKN1Q96NZ8 548 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 OR2V2Q96R30 315 aa22.34■■□□□ 1.17
LDB1-202ENST00000425280 SPTA1P02549 2419 aa22.33■■□□□ 1.17
LDB1-202ENST00000425280 POM121CA8CG34 1229 aa22.33■■□□□ 1.17
LDB1-202ENST00000425280 ATXN7O15265 892 aaPredicted RBP22.33■■□□□ 1.17
LDB1-202ENST00000425280 SPRY3O43610 288 aa22.33■■□□□ 1.17
LDB1-202ENST00000425280 IFNA2P01563 188 aa22.33■■□□□ 1.17
LDB1-202ENST00000425280 CTXN2P0C2S0 81 aa22.33■■□□□ 1.17
LDB1-202ENST00000425280 SSTR2P30874 369 aa22.33■■□□□ 1.17
LDB1-202ENST00000425280 ZNF81P51508 661 aa22.33■■□□□ 1.17
LDB1-202ENST00000425280 HLA-DRB3P79483 266 aa22.33■■□□□ 1.17
LDB1-202ENST00000425280 ATXN7L3Q14CW9 347 aaPredicted RBP22.33■■□□□ 1.17
LDB1-202ENST00000425280 SGPP2Q8IWX5 399 aa22.33■■□□□ 1.17
LDB1-202ENST00000425280 SLC38A6Q8IZM9 456 aa22.33■■□□□ 1.17
LDB1-202ENST00000425280 PIK3IP1Q96FE7 263 aa22.33■■□□□ 1.17
LDB1-202ENST00000425280 POLEQ07864 2286 aa22.33■■□□□ 1.16
LDB1-202ENST00000425280 TRAV14DV4A0A0A6YYC5 116 aa22.32■■□□□ 1.16
LDB1-202ENST00000425280 H7C1Q1 480 aa22.32■■□□□ 1.16
LDB1-202ENST00000425280 PSPNO60542 156 aa22.32■■□□□ 1.16
LDB1-202ENST00000425280 SMIM21Q3B7S5 101 aa22.32■■□□□ 1.16
LDB1-202ENST00000425280 RASL12Q9NYN1 266 aa22.32■■□□□ 1.16
LDB1-202ENST00000425280 TEX13DA0A0J9YY54 714 aaPredicted RBP22.32■■□□□ 1.16
LDB1-202ENST00000425280 TSC22D2O75157 780 aa22.32■■□□□ 1.16
LDB1-202ENST00000425280 SERPINF1P36955 418 aa22.32■■□□□ 1.16
LDB1-202ENST00000425280 ABCA11PQ4W5N1 156 aa22.32■■□□□ 1.16
LDB1-202ENST00000425280 OR4A4PQ8NGN8 299 aa22.32■■□□□ 1.16
LDB1-202ENST00000425280 PRR7Q8TB68 274 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms