RNA–Protein interactions for RNA: ENST00000420646.6

SNCA-206, Transcript of synuclein alpha, humanhuman

TSL 2 BASIC

Gene SNCA, Length 3,127 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-206ENST00000420646 ZADH2Q8N4Q0 377 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 OR1S1Q8NH92 325 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 NANOS1Q8WY41 292 aaKnown RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 TP53RKQ96S44 253 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 SMIM3Q9BZL3 60 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 OR51I2Q9H344 312 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 ZNF71Q9NQZ8 489 aaPredicted RBP7.49□□□□□ -1.21
SNCA-206ENST00000420646 OR14J1Q9UGF5 321 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 SH3BGRL2Q9UJC5 107 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 EDARQ9UNE0 448 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 CSMD1Q96PZ7 3565 aa7.49□□□□□ -1.21
SNCA-206ENST00000420646 CRYM-AS1A6NIL9 109 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 PPYP01298 95 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 SLC25A4P12235 298 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 C4BPBP20851 252 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 FOXC1Q12948 553 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 ELP2Q6IA86 826 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 TMEM65Q6PI78 240 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 C22orf34Q6ZV56 151 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 SLC51BQ86UW2 128 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 FAM58AQ8N1B3 248 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 SCARB1Q8WTV0 552 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 GTF3AQ92664 365 aaKnown RBP7.48□□□□□ -1.21
SNCA-206ENST00000420646 STARD4Q96DR4 205 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 SCGB3A2Q96PL1 93 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 RAB18Q9NP72 206 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 OBP2BQ9NPH6 170 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 LSM5Q9Y4Y9 91 aaKnown RBP7.48□□□□□ -1.21
SNCA-206ENST00000420646 HECTD1Q9ULT8 2610 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 AQP7O14520 342 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 HSD17B6O14756 317 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 RRP8O43159 456 aaKnown RBP7.48□□□□□ -1.21
SNCA-206ENST00000420646 PHF1O43189 567 aaPredicted RBP7.48□□□□□ -1.21
SNCA-206ENST00000420646 CA11O75493 328 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 CTSDP07339 412 aaPredicted RBP7.48□□□□□ -1.21
SNCA-206ENST00000420646 CECR9P0C854 216 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 GNRHRP30968 328 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 ASCL1P50553 236 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 PPA1Q15181 289 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 GUSBP1Q15486 140 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 RTL6Q6ICC9 239 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 RGS7BPQ6MZT1 257 aaPredicted RBP7.48□□□□□ -1.21
SNCA-206ENST00000420646 POC1AQ8NBT0 407 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 GLYATL2Q8WU03 294 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 SARAFQ96BY9 339 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 ADAT1Q9BUB4 502 aaKnown RBP7.48□□□□□ -1.21
SNCA-206ENST00000420646 PARP12Q9H0J9 701 aaKnown RBP7.48□□□□□ -1.21
SNCA-206ENST00000420646 SDHAF2Q9NX18 166 aa7.48□□□□□ -1.21
SNCA-206ENST00000420646 MLNRO43193 412 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 B3GALNT1O75752 331 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 EIF2S3P41091 472 aaKnown RBP7.47□□□□□ -1.21
SNCA-206ENST00000420646 AKR1C2P52895 323 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 AKR1C1Q04828 323 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 PRAMEF6Q5VXH4 476 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 TMEM211Q6ICI0 200 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 ZNF573Q86YE8 665 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 OR52M1Q8NGK5 317 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 BSCL2Q96G97 398 aaPredicted RBP7.47□□□□□ -1.21
SNCA-206ENST00000420646 C2orf50Q96LR7 162 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 LINC00052Q96N35 136 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 TECTBQ96PL2 329 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 REG4Q9BYZ8 158 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 NMES1Q9C002 83 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 Q9N2K0 584 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 BCL2L11O43521 198 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 NAPSAO96009 420 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 MSMPQ1L6U9 139 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 VHLLQ6RSH7 139 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 ZNF818PQ6ZRF7 136 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 LRP11Q86VZ4 500 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 GAPTQ8N292 157 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 STPG2Q8N412 459 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 TPRX1Q8N7U7 411 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 RBMXL3Q8N7X1 1067 aaKnown RBP7.47□□□□□ -1.21
SNCA-206ENST00000420646 Q8NFD4 153 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 TMED6Q8WW62 240 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 KIRREL1Q96J84 757 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 DECR2Q9NUI1 292 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 OR1A1Q9P1Q5 309 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 MPC1Q9Y5U8 109 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 ZNF462Q96JM2 2506 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 A0A0D9SG52 128 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 PROB1E7EW31 1015 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 DEGS1O15121 323 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 CEACAM4O75871 244 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 OR2F2O95006 317 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 ZNF83P51522 516 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 HERV-K104P61576 105 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 OR2F1Q13607 317 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 TMEM187Q14656 261 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 IZUMO4Q1ZYL8 232 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 MRPL30Q8TCC3 161 aaKnown RBP7.47□□□□□ -1.21
SNCA-206ENST00000420646 MOB3AQ96BX8 217 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 MS4A7Q9GZW8 240 aaPredicted RBP7.47□□□□□ -1.21
SNCA-206ENST00000420646 NAA60Q9H7X0 242 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 CCL28Q9NRJ3 127 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 PCDHB16Q9NRJ7 776 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 C1orf123Q9NWV4 160 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 DUSP13Q9UII6 198 aa7.47□□□□□ -1.21
SNCA-206ENST00000420646 FAM215AQ9Y5M1 114 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms